CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1616098_at

Gene name hypothetical protein LOC100244716

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.61 83.2 1616098_at CF514166 hypothetical protein LOC100244716 - 3e-4 At5g54840 SGP1 S.X. H.G.
0.50 72.7 1611115_s_at CB344303 hypothetical protein LOC100244716 - 3e-20 At3g21700 SGP2 S.X. H.G.
0.43 61.5 1611709_at CA816922 hypothetical protein LOC100249539 - 7e-1 At3g45870 integral membrane family protein / nodulin MtN21-related S.X. H.G.
0.40 57.7 1609526_at CF210472 hypothetical protein LOC100261349 - 2e+0 At5g47520 AtRABA5a (Arabidopsis Rab GTPase homolog A5a) S.X. H.G.
0.36 50.7 1611381_at CF518081 hypothetical protein LOC100263252 - 3e-1 At3g12940 unknown protein S.X. H.G.
0.23 27.5 1621439_s_at CB343781 hypothetical protein LOC100262404 - 6e-3 At1g71520 AP2 domain-containing transcription factor, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
10.9 99.7 GSM436409 V. riparia (VR, PI588259) SD, 13h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
8.6 99.5 GSM436410 V. riparia (VR, PI588259) SD, 13h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
7.0 99.1 GSM322369 genotype: Incrocio Manzoni - disease type: Healthy - rep1 GSE12842 Gene expression in grapevine in response to Bois noir infection
6.8 99.0 GSM322366 genotype: Chardonnay - disease type: Healthy - rep3 GSE12842 Gene expression in grapevine in response to Bois noir infection
6.5 98.9 GSM322363 genotype: Chardonnay - disease type: Bois Noir infected - rep3 GSE12842 Gene expression in grapevine in response to Bois noir infection
6.1 98.7 GSM322370 genotype: Incrocio Manzoni - disease type: Healthy - rep2 GSE12842 Gene expression in grapevine in response to Bois noir infection
5.5 98.4 GSM322368 genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2 GSE12842 Gene expression in grapevine in response to Bois noir infection
4.7 97.7 GSM322365 genotype: Chardonnay - disease type: Healthy - rep2 GSE12842 Gene expression in grapevine in response to Bois noir infection
4.6 97.6 GSM436350 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
4.3 97.2 GSM322361 genotype: Chardonnay - disease type: Bois Noir infected - rep1 GSE12842 Gene expression in grapevine in response to Bois noir infection
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e-2 38 1622309_at CB910741 hypothetical protein LOC100251543 - 3e-1 At4g08640 ATP binding / protein binding C.G. S.X.
0.03 3e-1 34 1614873_at CB915755 hypothetical protein LOC100255236 - 2e+0 At3g21680 unknown protein C.G. S.X.
0.02 1e+0 32 1619750_at CB977900 - - 5e-1 At1g44941 unknown protein C.G. S.X.
0.03 1e+0 32 1615257_at CB972713 hexose transporter-like - 6e-12 At4g35300 TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2) C.G. S.X.
0.02 5e+0 30 1622223_at BQ794199 hypothetical protein LOC100264264 - 1e-11 At1g67325 binding / zinc ion binding C.G. S.X.
0.03 5e+0 30 1621642_at CF516142 hypothetical protein LOC100267838 - 1e-22 At4g08170 inositol 1,3,4-trisphosphate 5/6-kinase family protein C.G. S.X.
0.02 5e+0 30 1616840_at CF608637 hypothetical protein LOC100255499 - 9e-15 At1g09140 SF2/ASF-like splicing modulator (SRP30) C.G. S.X.
0.02 5e+0 30 1612986_at CB348805 hypothetical protein LOC100249064 - 5e-16 At1g73180 eukaryotic translation initiation factor-related C.G. S.X.
0.02 5e+0 30 1612997_a_at CA814228 hypothetical protein LOC100242640 - 1e-4 At3g26510 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e-4 46 Arabidopsis thaliana At5g54840 835574 SGP1 Monomeric G protein. Expressed in the root quiescent center, flowers, and leaf guard cells and hydathodes. - - - C.G. S.X.
0.05 4e-1 36 Glycine max GmaAffx.15214.3.S1_at CA784587 - - 8e-1 At1g07135 glycine-rich protein C.G. S.X.
0.04 2e+0 32 Hordeum vulgare HVSMEg0007B03f_at HVSMEg0007B03f autophagy protein 9 - 3e+0 At4g36060 basic helix-loop-helix (bHLH) family protein C.G. S.X.
0.03 8e+0 32 Oryza sativa Os.7955.1.A1_at - - - 0 C.G. S.X.
0.12 3e-11 69 Populus trichocarpa PtpAffx.211200.1.S1_at pmrna22010 hypothetical protein - 7e-40 At5g54840 SGP1 C.G. S.X.
0.04 4e+0 32 Triticum aestivum TaAffx.112489.1.S1_at CA623500 - - 5e-1 At2g17705 unknown protein C.G. S.X.
0.04 2e+0 32 Zea mays ZmAffx.1100.1.A1_at AW146995 - - 4e-1 At5g01940 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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