Gene omics information

Query gene ID 1616054_at
Gene name
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7189.51616054_atCF515616--9e-1At1g29962AGL64 (AGAMOUS-LIKE 64)S.X.H.G.
0.5072.71612118_atBQ796684--4e+0At5g05930guanylyl cyclase-related (GC1)S.X.H.G.
0.2428.71611432_atBM437627hypothetical protein LOC100265313-3e-5At5g54490PBP1 (PINOID-BINDING PROTEIN 1)S.X.H.G.
0.1920.91613617_atCB343285--1e+0At2g42670unknown proteinS.X.H.G.
0.066.81609871_atCK138134.1--1e+0At4g40045unknown proteinS.X.H.G.
0.023.21614773_atCA809316--4e+0At3g08600unknown proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
19.599.9GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71
13.299.8GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56
12.099.8GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49
7.699.3GSM147724Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation53
7.599.2GSM147709Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation38
4.997.9GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
4.897.8GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37
3.796.2GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67
3.395.2GSM436373Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
3.294.9GSM436370Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.089e-261151607013_a_atCA814207hypothetical protein LOC100241044-1e-1At4g14720PPD2C.G.S.X.
0.017e-2361608792_s_atCF513346hypothetical protein LOC100250896-2e-138At5g50920CLPC1C.G.S.X.
0.033e-1341619194_atCB981838--4e+0At4g07820pathogenesis-related protein, putativeC.G.S.X.
0.033e-1341618352_atCA817744hypothetical protein LOC100255155-2e-8At3g52040unknown proteinC.G.S.X.
0.023e-1341617387_atBQ793951--3e-15At4g08500MEKK1 (MAP KINASE KINASE KINASE 1)C.G.S.X.
0.031e+0321617624_atCB970729hypothetical protein LOC100260069-4e-11At1g17370UBP1B (oligouridylate binding protein 1B)C.G.S.X.
0.011e+0321612196_atBQ799110hypothetical protein LOC100254666-2e-14At3g25570adenosylmethionine decarboxylase family proteinC.G.S.X.
0.021e+0321611961_atCF516769hypothetical protein LOC100242919-2e-9At5g51620-C.G.S.X.
0.031e+0321611750_atCF203374.1--8e-30At3g17390MTO3 (METHIONINE OVER-ACCUMULATOR 3)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.049e-134Arabidopsis thalianaAt1g299625007741AGL64 (AGAMOUS-LIKE 64)F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PMFO---C.G.S.X.
0.058e-238Glycine maxHgAffx.21903.1.S1_atBI451655--3e+0At1g02740chromatin bindingC.G.S.X.
0.044e-134Hordeum vulgareEBro08_SQ010_D12_atEBro08_SQ010_D12--2e-1At5g03550-C.G.S.X.
0.047e+032Oryza sativaOsAffx.26446.1.S1_at---0C.G.S.X.
0.041e+034Populus trichocarpaPtpAffx.3207.4.S1_atDN500101hypothetical protein-6e-9At1g29810dehydratase familyC.G.S.X.
0.054e+032Triticum aestivumTaAffx.80006.1.S1_x_atCA704420--4e+0At4g15930microtubule motorC.G.S.X.
0.042e+128Zea maysZmAffx.1327.1.S1_s_at40794996-36--2e+0At4g12735unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage