CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1616046_at

Gene name

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 89.5 1616046_at CD012880 - - 9e-6 At1g08280 glycosyl transferase family 29 protein / sialyltransferase family protein S.X. H.G.
0.71 89.5 1606871_at CB970216 hypothetical protein LOC100265666 - 1e-3 At4g11090 unknown protein S.X. H.G.
0.55 77.3 1616682_at CF512457 hypothetical protein LOC100266059 - 9e-37 At4g18030 dehydration-responsive family protein S.X. H.G.
0.22 25.6 1606682_at BQ796871 hypothetical protein LOC100265566 - 2e-18 At2g30460 - S.X. H.G.
0.19 20.9 1608494_at CF603964 hypothetical protein LOC100253260 - 1e-76 At2g34560 katanin, putative S.X. H.G.
0.16 16.7 1608307_at CF209143 hypothetical protein LOC100247674 - 2e-1 At2g33300 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.9 96.6 GSM147718 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 47
3.6 96.0 GSM147743 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 72
3.5 95.7 GSM147742 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 71
3.3 95.2 GSM436389 V. riparia (VR, PI588259) LD, 15h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.2 94.9 GSM147719 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 48
3.1 94.6 GSM147724 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 53
3.1 94.6 GSM436388 V. riparia (VR, PI588259) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM147737 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 66
2.7 93.0 GSM436369 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.7 93.0 GSM436390 V. riparia (VR, PI588259) LD, 15h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 0 2099 1612227_at CD012880 - - 9e-6 At1g08280 glycosyl transferase family 29 protein / sialyltransferase family protein C.G. S.X.
0.02 2e-1 36 1620639_at CA817351 hypothetical protein LOC100247658 - 3e-1 At1g10455 unknown protein C.G. S.X.
0.01 6e-1 34 1622817_at CD012829 hypothetical protein LOC100251895 - 4e-42 At2g40660 tRNA-binding region domain-containing protein C.G. S.X.
0.01 6e-1 34 1617422_s_at AF378126.1 floricaula/leafy-like protein - 2e-8 At5g61850 LFY (LEAFY) C.G. S.X.
0.01 6e-1 34 1610157_at CD012829 - - 4e-42 At2g40660 tRNA-binding region domain-containing protein C.G. S.X.
0.02 3e+0 32 1621483_at BQ796003 hypothetical protein LOC100254964 - 2e-6 At1g12810 proline-rich family protein C.G. S.X.
0.02 3e+0 32 1619476_at CB836997 - - 6e+0 At5g43185 Expressed protein C.G. S.X.
0.01 3e+0 32 1618825_at CF511618 hypothetical protein LOC100266234 - 8e-19 At3g59690 IQD13 (IQ-domain 13) C.G. S.X.
0.02 3e+0 32 1616488_at CB346880 - - 1e+0 At1g07476 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 9e-6 52 Arabidopsis thaliana At1g08280 837348 glycosyl transferase family 29 protein / sialyltransferase family protein F:sialyltransferase activity;P:protein amino acid glycosylation;C:endomembrane system, integral to Golgi membrane, membrane;MPOV - - - C.G. S.X.
0.16 3e-6 54 Glycine max GmaAffx.3008.1.S1_at BI969331 - - 1e-9 At1g08280 glycosyl transferase family 29 protein / sialyltransferase family protein C.G. S.X.
0.02 4e+0 32 Hordeum vulgare HV_CEb0010M02r2_s_at HV_CEb0010M02r2 - - 3e+0 At5g27450 MK (MEVALONATE KINASE) C.G. S.X.
0.02 2e-2 42 Oryza sativa Os.53077.1.S1_at - - - 0 C.G. S.X.
0.39 8e-44 178 Populus trichocarpa PtpAffx.204485.1.S1_s_at pmrna8801 hypothetical protein - 2e-6 At1g08280 glycosyl transferase family 29 protein / sialyltransferase family protein C.G. S.X.
0.02 6e-1 36 Triticum aestivum TaAffx.86293.1.S1_x_at CA612009 - - 6e-2 At4g08400 proline-rich extensin-like family protein C.G. S.X.
0.02 4e+0 32 Zea mays Zm.5160.1.A1_at CD995815 - - 2e+0 At4g01897 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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