CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1616023_at

Gene name hypothetical protein LOC100252512

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 93.6 1616023_at CB979152 hypothetical protein LOC100252512 - 1e-38 At1g50140 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding S.X. H.G.
0.57 79.8 1615727_at CF205417.1 hypothetical protein LOC100261981 - 9e-2 At4g31470 pathogenesis-related protein, putative S.X. H.G.
0.55 77.3 1607312_at CF511987 hypothetical protein LOC100249902 - 5e+0 At3g12370 ribosomal protein L10 family protein S.X. H.G.
0.44 64.1 1619028_at CF205704.1 hypothetical protein LOC100248919 - 3e-26 At3g60620 phosphatidate cytidylyltransferase family protein S.X. H.G.
0.44 64.1 1608770_at CF211789 - - 6e-21 At3g60620 phosphatidate cytidylyltransferase family protein S.X. H.G.
0.27 34.0 1615943_at CB971749 hypothetical protein LOC100266273 - 5e-14 At1g51980 mitochondrial processing peptidase alpha subunit, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.5 95.7 GSM147729 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 58
3.4 95.5 GSM147723 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 52
3.1 94.6 GSM147720 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 49
3.1 94.6 GSM147738 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 67
3.0 94.2 GSM147717 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 46
2.8 93.4 GSM147728 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 57
2.7 93.0 GSM147740 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 69
2.7 93.0 GSM147727 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 56
2.6 92.5 GSM147708 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 37
2.6 92.5 GSM147721 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 50
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e-9 61 1606715_at CB981978 hypothetical protein LOC100260666 - 1e-69 At4g02480 AAA-type ATPase family protein C.G. S.X.
0.03 1e-1 36 1613610_at CB981685 - - 6e+0 At1g64680 unknown protein C.G. S.X.
0.04 1e-1 36 1610816_at CF210488 hypothetical protein LOC100252698 - 3e-18 At4g28000 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding C.G. S.X.
0.03 1e-1 36 1610177_at CB343788 - - 3e-4 At2g26080 AtGLDP2 (Arabidopsis thaliana glycine decarboxylase P-protein 2) C.G. S.X.
0.03 5e-1 34 1618166_at CD011399 - - 3e+0 At5g25210 unknown protein C.G. S.X.
0.04 5e-1 34 1615558_at BQ796963 hypothetical protein LOC100266414 - 4e-3 At3g18820 ATRAB7B (ARABIDOPSIS RAB GTPASE HOMOLOG G3F) C.G. S.X.
0.03 5e-1 34 1614385_at CD011399 hypothetical protein LOC100261646 - 3e+0 At5g25210 unknown protein C.G. S.X.
0.02 5e-1 34 1610475_at CB979928 hypothetical protein LOC100242577 - 1e-7 At4g20380 zinc finger protein (LSD1) C.G. S.X.
0.02 2e+0 32 1622556_at CB972747 hypothetical protein LOC100254279 - 6e-59 At1g73600 methyltransferase/ phosphoethanolamine N-methyltransferase C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 1e-38 161 Arabidopsis thaliana At1g50140 841436 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:biological_process unknown;C:cellular_component unknown;BOMFPAV - - - C.G. S.X.
0.12 2e-10 67 Glycine max GmaAffx.2451.1.S1_at BE822635 - - 3e-1 At2g32645 unknown protein C.G. S.X.
0.12 3e-6 52 Hordeum vulgare Contig9080_s_at Contig9080 - - 5e-14 At1g50140 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding C.G. S.X.
0.12 2e-23 111 Oryza sativa OsAffx.12590.1.S1_at - - - 0 C.G. S.X.
0.22 4e-42 173 Populus trichocarpa Ptp.2697.1.S1_at CK092312 hypothetical protein - 1e-91 At1g50140 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding C.G. S.X.
0.24 5e-16 85 Triticum aestivum Ta.6506.1.S1_at BJ272687 p60 katanin - 2e-25 At3g19740 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding C.G. S.X.
0.03 1e-5 50 Zea mays Zm.13693.1.A1_at AY106770.1 - - 6e-54 At4g02480 AAA-type ATPase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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