CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1615943_at

Gene name hypothetical protein LOC100266273

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 92.3 1615943_at CB971749 hypothetical protein LOC100266273 - 5e-14 At1g51980 mitochondrial processing peptidase alpha subunit, putative S.X. H.G.
0.67 87.9 1611911_at CF212492 hypothetical protein LOC100266461 - 1e-121 At5g08530 CI51 (51 kDa subunit of complex I) S.X. H.G.
0.67 87.9 1611694_at CB972078 hypothetical protein LOC100258865 - 2e-24 At2g21410 VHA-A2 (VACUOLAR PROTON ATPASE A2) S.X. H.G.
0.55 77.3 1606432_at CD013716 hypothetical protein LOC100242349 - 1e-4 At4g39690 unknown protein S.X. H.G.
0.44 64.1 1613094_at BQ794920 hypothetical protein LOC100261121 - 1e-13 At4g29350 PFN2 (PROFILIN 2) S.X. H.G.
0.29 37.7 1608447_at CB913704 hypothetical protein LOC100244219 - 3e-1 At3g44620 protein tyrosine phosphatase S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.2 94.9 GSM147730 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 59
3.1 94.6 GSM147743 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 72
2.9 93.8 GSM147719 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 48
2.9 93.8 GSM147742 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 71
2.6 92.5 GSM147715 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 44
2.6 92.5 GSM147731 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 60
2.6 92.5 GSM147718 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 47
2.5 91.9 GSM147724 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 53
2.5 91.9 GSM147714 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 43
2.4 91.3 GSM147716 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 45
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.47 1e-95 349 1614925_at CF607034 hypothetical protein LOC100259973 - 3e-18 At3g16480 MPPalpha (mitochondrial processing peptidase alpha subunit) C.G. S.X.
0.02 2e-1 36 1611343_at CB974830 hypothetical protein LOC100261168 - 6e+0 At3g15210 ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4) C.G. S.X.
0.01 8e-1 34 1621205_at CF514933 - - 5e-32 At1g13270 MAP1C (METHIONINE AMINOPEPTIDASE 1B) C.G. S.X.
0.02 8e-1 34 1611680_at CF415491 hypothetical protein LOC100266466 - 9e-5 At4g36890 IRX14 (irregular xylem 14) C.G. S.X.
0.02 3e+0 32 1621151_at CB971601 hypothetical protein LOC100260643 - 3e-1 At3g07260 forkhead-associated domain-containing protein / FHA domain-containing protein C.G. S.X.
0.02 3e+0 32 1620167_at CB970524 hypothetical protein LOC100247740 - 1e+0 At2g20450 60S ribosomal protein L14 (RPL14A) C.G. S.X.
0.01 3e+0 32 1619823_at CB969271 hypothetical protein LOC100261518 - 1e-4 At3g43720 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.02 3e+0 32 1619758_s_at CB003371 hypothetical protein LOC100254356 - 1e+0 At3g01600 anac044 (Arabidopsis NAC domain containing protein 44) C.G. S.X.
0.01 3e+0 32 1619505_a_at CB981292 hypothetical protein LOC100250945 - 6e-25 At2g01350 QPT (QUINOLINATE PHOSHORIBOSYLTRANSFERASE) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 5e-14 79 Arabidopsis thaliana At1g51980 841627 mitochondrial processing peptidase alpha subunit, putative F:metalloendopeptidase activity, ATP binding;P:proteolysis, response to salt stress;C:in 6 components;BOMFPAV - - - C.G. S.X.
0.43 5e-132 472 Glycine max Gma.5591.1.S1_at BM270542 - - 7e-11 At3g16480 MPPalpha (mitochondrial processing peptidase alpha subunit) C.G. S.X.
0.08 4e-19 95 Hordeum vulgare Contig6473_at Contig6473 - - 3e-4 At3g16480 MPPalpha (mitochondrial processing peptidase alpha subunit) C.G. S.X.
0.04 2e-11 71 Oryza sativa Os01g0966300 AK073175.1 - Mitochondrial processing peptidase 2e-4 At1g51980 mitochondrial processing peptidase alpha subunit, putative C.G. S.X.
0.17 5e-33 143 Populus trichocarpa PtpAffx.2333.1.S1_at CK091733 hypothetical protein - 2e+0 At1g47720 OSB1 (Organellar Single-stranded) C.G. S.X.
0.17 4e-30 133 Triticum aestivum Ta.7456.2.S1_at BJ319888 - - 3e-4 At3g16480 MPPalpha (mitochondrial processing peptidase alpha subunit) C.G. S.X.
0.05 2e-14 79 Zea mays Zm.2799.1.S1_at CF244455 - - 2e-5 At3g16480 MPPalpha (mitochondrial processing peptidase alpha subunit) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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