Gene omics information

Query gene ID	1615832_at
Gene name	hypothetical protein LOC100242360
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.56	79.4	1615832_at	BQ792735	hypothetical protein LOC100242360	-	1e-10	At2g24860	chaperone protein dnaJ-related	S.X.	H.G.	Please select
0.61	83.2	1611322_at	CF202963.1	pyruvate decarboxylase 1	-	2e-15	At5g54960	PDC2 (pyruvate decarboxylase-2)	S.X.	H.G.	Please select
0.55	77.3	1608530_at	CB971070	hypothetical protein LOC100265997	-	2e-4	At5g64460	-	S.X.	H.G.	Please select
0.50	72.7	1608145_at	CF206738.1	hypothetical protein LOC100249147	-	9e-33	At2g23420	NAPRT2 (NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2)	S.X.	H.G.	Please select
0.40	57.7	1610300_at	CF518694	-	-	9e-7	At3g23200	unknown protein	S.X.	H.G.	Please select
0.36	50.7	1608292_at	CA817093	hypothetical protein LOC100241035	-	7e-30	At5g57690	diacylglycerol kinase	S.X.	H.G.	Please select

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
12.7	99.8	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
12.3	99.8	GSM299457	C_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
10.3	99.6	GSM299459	D_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
9.8	99.6	GSM299456	C_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
7.9	99.3	GSM299454	B_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
6.6	98.9	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
5.9	98.6	GSM299460	D_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
5.3	98.2	GSM299458	D_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
5.2	98.2	GSM299455	C_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.7	97.7	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	5e-1	34	1621288_at	CB972014	hypothetical protein LOC100252015	-	2e+0	At5g50030	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please select
0.03	2e+0	32	1615748_at	CD801267	-	-	9e-4	At5g65610	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	32	1614118_at	CD010339	-	-	3e-17	At2g14910	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	32	1611526_at	CF604832	hypothetical protein LOC100251026	-	8e-51	At1g10730	clathrin adaptor complexes medium subunit family protein	C.G.	S.X.	Please select
0.01	2e+0	32	1610663_at	CF207750	hypothetical protein LOC100260286	-	0	At5g19770	TUA3	C.G.	S.X.	Please select
0.02	2e+0	32	1610329_at	CD010339	hypothetical protein LOC100267925	-	3e-17	At2g14910	unknown protein	C.G.	S.X.	Please select
0.02	7e+0	30	1618863_at	CF208339	hypothetical protein LOC100254505	-	3e-9	At3g23640	HGL1 (heteroglycan glucosidase 1)	C.G.	S.X.	Please select
0.01	7e+0	30	1618539_at	CF513048	hypothetical protein LOC100267633	-	1e-2	At2g41950	unknown protein	C.G.	S.X.	Please select
0.02	7e+0	30	1618495_at	CF404004	-	-	1e-6	At1g31800	CYP97A3 (CYTOCHROME P450-TYPE MONOOXYGENASE 97A3)	C.G.	S.X.	Please select

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.10	1e-10	67	Arabidopsis thaliana	At2g24860	817023	chaperone protein dnaJ-related	F:unfolded protein binding, heat shock protein binding;P:protein folding;C:unknown;PBMOF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.19	9e-6	52	Glycine max	GmaAffx.20083.1.A1_at	BU550593	-	-	3e-4	At2g24860	chaperone protein dnaJ-related	C.G.	S.X.	Please select
0.02	3e+0	32	Hordeum vulgare	Contig8459_at	Contig8459	-	-	4e-1	At4g36900	RAP2.10 (related to AP2 10)	C.G.	S.X.	Please select
0.03	3e+0	34	Oryza sativa	OsAffx.15837.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.31	1e-41	171	Populus trichocarpa	Ptp.6105.1.S1_at	BU898024	hypothetical protein	-	3e-14	At2g24860	chaperone protein dnaJ-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	7e-3	42	Triticum aestivum	TaAffx.110415.2.S1_at	CA659186	-	-	1e+0	At5g19151	unknown protein	C.G.	S.X.	Please select
0.03	1e+1	30	Zea mays	ZmAffx.933.1.S1_at	AI795521	-	-	3e+0	At5g18100	CSD3 (copper/zinc superoxide dismutase 3)	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage