Gene omics information

Query gene ID	1615811_a_at
Gene name	hypothetical protein LOC100240940
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.81	93.7	1615811_a_at	CF214981	hypothetical protein LOC100240940	-	4e-86	At3g16630	KINESIN-13A	S.X.	H.G.	Please select
0.35	48.5	1607383_at	CF514958	similar to Os02g0672700	-	2e+0	At5g42410	auxin-responsive family protein	S.X.	H.G.	Please select
0.35	48.5	1620213_at	CB981229	hypothetical protein LOC100252268	-	5e-1	At1g13600	AtbZIP58 (Arabidopsis thaliana basic leucine-zipper 58)	S.X.	H.G.	Please select
0.29	37.7	1615105_s_at	CF568901	hypothetical protein LOC100256979	-	0	At1g07930	elongation factor 1-alpha / EF-1-alpha	S.X.	H.G.	Please select
0.27	34.0	1614241_at	CF209157	hypothetical protein LOC100255909	-	7e-6	At1g14685	BPC2 (BASIC PENTACYSTEINE 2)	S.X.	H.G.	Please select
0.27	34.0	1610877_at	CF517648	hypothetical protein LOC100241489	-	5e-10	At3g02760	ATP binding / aminoacyl-tRNA ligase/ histidine-tRNA ligase/ nucleotide binding	S.X.	H.G.	Please select
0.27	34.0	1616450_at	BQ797532	hypothetical protein LOC100264578	-	3e-23	At1g48790	mov34 family protein	S.X.	H.G.	Please select
0.26	32.0	1607275_at	CF210833	hypothetical protein LOC100261812	-	7e-13	At3g15980	coatomer protein complex, subunit beta 2 (beta prime), putative	S.X.	H.G.	Please select
0.23	27.5	1620627_at	CF214379	hypothetical protein LOC100259195	-	1e-22	At1g20110	zinc finger (FYVE type) family protein	S.X.	H.G.	Please select
0.22	25.6	1612204_at	CB921241	hypothetical protein LOC100256288	-	1e-47	At3g03110	XPO1B	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.4	95.5	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.8	93.4	GSM436369	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.2	89.9	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.2	89.9	GSM436391	V. riparia (VR, PI588259) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.94	0	1743	1611856_at	CF214981	hypothetical protein LOC100240940	-	4e-86	At3g16630	KINESIN-13A	C.G.	S.X.	Please select
0.13	5e-77	287	1615339_at	CB972206	-	-	1e-3	At4g15885	kinesin motor protein-related	C.G.	S.X.	Please select
0.02	2e-2	40	1608595_at	CF413802	-	-	1e+0	At4g04580	myb family transcription factor	C.G.	S.X.	Please select
0.01	3e-1	36	1613557_at	BM436858	-	-	4e-66	At4g37640	ACA2 (CALCIUM ATPASE 2)	C.G.	S.X.	Please select
0.01	3e-1	36	1609778_at	BM436858	hypothetical protein LOC100262693	-	4e-66	At4g37640	ACA2 (CALCIUM ATPASE 2)	C.G.	S.X.	Please select
0.01	1e+0	34	1614205_at	CF404132	hypothetical protein LOC100256824	-	7e-9	At2g02960	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.01	1e+0	34	1609732_at	CF415377	hypothetical protein LOC100253369	-	4e-3	At3g15870	oxidoreductase	C.G.	S.X.	Please select
0.01	4e+0	32	1622187_at	CF516794	hypothetical protein LOC100262936	-	4e-119	At3g18190	chaperonin, putative	C.G.	S.X.	Please select
0.01	4e+0	32	1620649_at	AY427191.1	-	-	5e-1	At3g53550	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.41	4e-86	319	Arabidopsis thaliana	At3g16630	820915	KINESIN-13A	Kinesin-13A localized to entire Golgi stacks. Involved in trichome development.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.26	3e-75	284	Glycine max	GmaAffx.53049.1.S1_at	AW508613	-	-	5e-27	At3g16630	KINESIN-13A	C.G.	S.X.	Please select
0.06	8e-9	61	Hordeum vulgare	Contig14056_at	Contig14056	-	-	6e-20	At3g16060	kinesin motor family protein	C.G.	S.X.	Please select
0.40	3e-70	268	Oryza sativa	Os05g0154700	AK064328.1	-	Kinesin heavy chain (Fragment)	5e-18	At3g16630	KINESIN-13A	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.43	9e-156	551	Populus trichocarpa	PtpAffx.219045.1.S1_s_at	pmrna34843	hypothetical protein	-	6e-54	At3g16630	KINESIN-13A	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.14	3e-41	171	Triticum aestivum	Ta.4571.2.S1_at	BJ270791	-	-	2e-28	At3g16630	KINESIN-13A	C.G.	S.X.	Please select
0.36	7e-46	184	Zea mays	Zm.7332.1.S1_at	CF013037	kinesin-like protein9	-	2e-24	At3g16630	KINESIN-13A	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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