Gene omics information

Query gene ID 1615801_at
Gene name
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.81615801_atCK138174.1--4e-1At1g650604CL3S.X.H.G.
0.8394.61611724_atCB346313hypothetical protein LOC100242039-1e+0At1g48460unknown proteinS.X.H.G.
0.8394.61618535_atCA818656hypothetical protein LOC100252930-4e+0At5g62623-S.X.H.G.
0.8394.61609267_atCK138210.1hypothetical protein LOC100243236-4e-16At5g58860CYP86A1 (CYTOCHROME P450 86 A1)S.X.H.G.
0.8394.61613802_atCB974339hypothetical protein LOC100245819-4e+0At4g01650-S.X.H.G.
0.7792.31615649_atBQ800288hypothetical protein LOC100257872-4e+0At3g22620protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
30.3100.0GSM436423V. riparia (VR, PI588259) SD, 13h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
24.2100.0GSM436426V. riparia (VR, PI588259) SD, 13h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
22.4100.0GSM436422V. riparia (VR, PI588259) SD, 13h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
17.499.9GSM436421V. riparia (VR, PI588259) SD, 13h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
16.399.9GSM436424V. riparia (VR, PI588259) SD, 13h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
12.199.8GSM436403V. riparia (VR, PI588259) LD, 15h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
11.499.7GSM436408V. riparia (VR, PI588259) LD, 15h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
9.399.6GSM436425V. riparia (VR, PI588259) SD, 13h 28 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
7.099.1GSM436418V. riparia (VR, PI588259) SD, 13h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
6.999.1GSM436406V. riparia (VR, PI588259) LD, 15h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.373e-512001609307_atCD715818hypothetical protein LOC100254698-3e-16At3g212404CL2 (4-COUMARATE:COA LIGASE 2)C.G.S.X.
0.034e-1341622415_atCF519029--4e+0At4g04953unknown proteinC.G.S.X.
0.024e-1341615527_atCF372317hypothetical protein LOC100246222-7e+0At5g39860PRE1 (PACLOBUTRAZOL RESISTANCE1)C.G.S.X.
0.024e-1341614959_atBQ799150hypothetical protein LOC100257499-1e-10At5g47060senescence-associated protein-relatedC.G.S.X.
0.024e-1341614504_s_atCF372317hypothetical protein LOC100246222-7e+0At5g39860PRE1 (PACLOBUTRAZOL RESISTANCE1)C.G.S.X.
0.034e-1341614450_atCF404206hypothetical protein LOC100267971-1e-1At4g36540BEE2 (BR Enhanced Expression 2)C.G.S.X.
0.034e-1341613232_atCF516759hypothetical LOC100244581-1e+0At1g15710prephenate dehydrogenase family proteinC.G.S.X.
0.034e-1341607414_atCF511773hypothetical protein LOC100255365-1e+0At1g02330-C.G.S.X.
0.022e+0321622562_atCD006619--7e-40At1g79510unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.064e-136Arabidopsis thalianaAt1g650608428144CL3encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. mRNA levels are not induced in response to wounding or to fungal infection by P. parasitica. mRNA is expressed in flowers, to a lesser degree in mature leaves and siliques and marginally in seedling roots and bolting stems of mature plants. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, cinnamic acid and 5-OH-ferulic acid. At4CL3 was unable to use sinapic acid as substrate.---C.G.S.X.
0.153e-859Glycine maxGma.1190.1.S1_atAF279267.14-coumarate:coenzyme A ligase-1e-3At1g516804CL1 (4-COUMARATE:COA LIGASE 1)C.G.S.X.
0.037e-134Hordeum vulgareHU08H24u_s_atHU08H24u--3e+0At4g17150unknown proteinC.G.S.X.
0.037e-446Oryza sativaOs06g0656500AK068985.1--2e-2At3g212404CL2 (4-COUMARATE:COA LIGASE 2)C.G.S.X.
0.263e-30133Populus trichocarpaPtpAffx.87600.2.S1_atAF008183.14-Coumarate:CoA ligase-3e-4At1g650604CL3C.G.S.X.
0.044e-446Triticum aestivumTaAffx.8533.2.S1_atCA627108--4e-3At3g212304CL5 (4-coumarate:CoA ligase 5)C.G.S.X.
0.032e+032Zea maysZmAffx.1025.1.A1_atAI770423--8e-1At2g25312-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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