CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1615727_at

Gene name hypothetical protein LOC100261981

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 90.8 1615727_at CF205417.1 hypothetical protein LOC100261981 - 9e-2 At4g31470 pathogenesis-related protein, putative S.X. H.G.
0.80 93.6 1616023_at CB979152 hypothetical protein LOC100252512 - 1e-38 At1g50140 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding S.X. H.G.
0.60 81.9 1622086_at CF207289 hypothetical protein LOC100265288 - 1e-1 At2g20480 unknown protein S.X. H.G.
0.44 64.1 1608770_at CF211789 - - 6e-21 At3g60620 phosphatidate cytidylyltransferase family protein S.X. H.G.
0.33 45.7 1619028_at CF205704.1 hypothetical protein LOC100248919 - 3e-26 At3g60620 phosphatidate cytidylyltransferase family protein S.X. H.G.
0.29 37.7 1615943_at CB971749 hypothetical protein LOC100266273 - 5e-14 At1g51980 mitochondrial processing peptidase alpha subunit, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.2 94.9 GSM147718 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 47
3.1 94.6 GSM147743 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 72
3.0 94.2 GSM147722 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 51
2.8 93.4 GSM147719 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 48
2.8 93.4 GSM147721 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 50
2.8 93.4 GSM147739 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 68
2.7 93.0 GSM147740 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 69
2.7 93.0 GSM147729 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 58
2.7 93.0 GSM147715 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 44
2.5 91.9 GSM147723 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 52
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 7e-3 40 1621615_at CD797653 hypothetical protein LOC100249461 - 2e-2 At5g14050 transducin family protein / WD-40 repeat family protein C.G. S.X.
0.02 3e-2 38 1619019_at CF213490 hypothetical protein LOC100243336 - 2e-102 At5g67560 ATARLA1D (ADP-ribosylation factor-like A1D) C.G. S.X.
0.03 4e-1 34 1618000_at CD721411 - - 2e-55 At3g24180 catalytic/ glucosylceramidase C.G. S.X.
0.03 4e-1 34 1617373_s_at CA816697 hypothetical protein LOC100245878 - 5e-6 At5g23570 SGS3 (SUPPRESSOR OF GENE SILENCING 3) C.G. S.X.
0.03 4e-1 34 1614197_at CD721411 similar to catalytic - 2e-55 At3g24180 catalytic/ glucosylceramidase C.G. S.X.
0.03 4e-1 34 1607841_at CA816697 hypothetical protein LOC100245878 - 5e-6 At5g23570 SGS3 (SUPPRESSOR OF GENE SILENCING 3) C.G. S.X.
0.02 2e+0 32 1621877_at CB922518 hypothetical protein LOC100241998 - 6e-6 At3g44590 60S acidic ribosomal protein P2 (RPP2D) C.G. S.X.
0.02 2e+0 32 1612899_at CB981427 - - 2e+0 At3g20960 CYP705A33 C.G. S.X.
0.02 2e+0 32 1610211_at CB922518 - - 6e-6 At3g44590 60S acidic ribosomal protein P2 (RPP2D) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 9e-2 38 Arabidopsis thaliana At4g31470 829274 pathogenesis-related protein, putative F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOB - - - C.G. S.X.
0.19 1e-26 121 Glycine max GmaAffx.7212.1.A1_at AW156164 - - 6e-3 At1g32400 TOM2A (TOBAMOVIRUS MULTIPLICATION 2A) C.G. S.X.
0.04 3e+0 32 Hordeum vulgare Contig17976_at Contig17976 - - 6e+0 At5g66350 SHI (SHORT INTERNODES) C.G. S.X.
0.03 7e-4 46 Oryza sativa Os04g0395400 9632.m03092 - Conserved hypothetical protein 3e+0 At4g13850 GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2) C.G. S.X.
0.17 9e-9 61 Populus trichocarpa PtpAffx.40351.1.S1_a_at DN486437 hypothetical protein - 2e+0 At5g13850 NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3) C.G. S.X.
0.04 2e+0 34 Triticum aestivum TaAffx.109350.1.S1_at CA676688 - - 6e-2 At4g14695 unknown protein C.G. S.X.
0.02 1e+1 30 Zea mays Zm.350.1.S1_at U62753.1 acidic ribosomal protein P2b - 4e-1 At2g27710 60S acidic ribosomal protein P2 (RPP2B) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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