CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1615702_at

Gene name hypothetical protein LOC100268087

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 75.2 1615702_at BQ797006 hypothetical protein LOC100268087 - 4e-5 At1g17980 nucleotidyltransferase family protein S.X. H.G.
0.59 80.6 1615929_at CB970992 hypothetical protein LOC100246610 - 7e-16 At5g49580 DNAJ heat shock N-terminal domain-containing protein S.X. H.G.
0.55 77.3 1613489_at CF403663 - - 5e+0 At3g25572 CPuORF11 (Conserved peptide upstream open reading frame 11) S.X. H.G.
0.50 72.7 1611587_at CF511115 hypothetical protein LOC100266068 - 4e+0 At5g51545 LPA2 (low psii accumulation2) S.X. H.G.
0.50 72.7 1620419_at BQ794848 hypothetical protein LOC100241492 - 5e-1 At2g46330 AGP16 (ARABINOGALACTAN PROTEIN 16) S.X. H.G.
0.35 48.5 1617244_s_at CB341989 hypothetical protein LOC100262315 - 1e-23 At4g22150 PUX3 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
2.9 93.8 GSM436414 V. riparia (VR, PI588259) SD, 13h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.6 92.5 GSM436393 V. riparia (VR, PI588259) LD, 15h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.5 91.9 GSM436413 V. riparia (VR, PI588259) SD, 13h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.4 91.3 GSM436391 V. riparia (VR, PI588259) LD, 15h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.3 90.7 GSM436424 V. riparia (VR, PI588259) SD, 13h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.3 90.7 GSM436350 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.2 89.9 GSM436406 V. riparia (VR, PI588259) LD, 15h 42 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.2 89.9 GSM436371 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.2 89.9 GSM436421 V. riparia (VR, PI588259) SD, 13h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.2 89.9 GSM436390 V. riparia (VR, PI588259) LD, 15h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 2e-1 36 1616332_at CF210511 hypothetical protein LOC100259445 - 2e-1 At4g27660 unknown protein C.G. S.X.
0.02 8e-1 34 1622569_at BQ792969 hypothetical protein LOC100245328 - 1e+0 At5g10710 protein binding C.G. S.X.
0.02 8e-1 34 1615130_at CB974807 hypothetical protein LOC100243401 - 9e-5 At5g33370 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.02 3e+0 32 1622553_a_at BQ797594 hypothetical protein LOC100267624 - 1e-34 At5g18190 protein kinase family protein C.G. S.X.
0.01 3e+0 32 1622373_at CF516583 - - 4e-1 At4g25410 DNA binding / transcription factor C.G. S.X.
0.02 3e+0 32 1622139_at CB344698 - - 4e+0 At2g18270 unknown protein C.G. S.X.
0.02 3e+0 32 1621587_at CF214129 adenosine 5'-phosphosulfate reductase - 8e-11 At4g21990 APR3 (APS REDUCTASE 3) C.G. S.X.
0.01 3e+0 32 1621005_at CF213296 hypothetical protein LOC100266419 - 2e-5 At3g24420 hydrolase, alpha/beta fold family protein C.G. S.X.
0.02 3e+0 32 1620592_at CF515947 - - 1e+0 At5g41450 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e-5 50 Arabidopsis thaliana At1g17980 838378 nucleotidyltransferase family protein F:protein binding, nucleotidyltransferase activity;P:RNA polyadenylation;C:nucleus;MFOPB - - - C.G. S.X.
0.06 4e-3 44 Glycine max GmaAffx.82399.1.S1_at AI441111 - - 3e-1 At3g29575 AFP3 (ABI FIVE BINDING PROTEIN 3) C.G. S.X.
0.02 3e-1 36 Hordeum vulgare Contig13895_at Contig13895 - - 6e+0 At5g13830 FtsJ-like methyltransferase family protein C.G. S.X.
0.01 1e+0 36 Oryza sativa Os08g0327400 AK070992.1 - Enoyl-[acyl-carrier-protein] reductase [NADH],chloroplast precursor (EC 1.3.1.9) (NADH-dependentenoyl-ACP reductase) 2e-32 At2g05990 MOD1 (MOSAIC DEATH 1) C.G. S.X.
0.15 1e-27 125 Populus trichocarpa PtpAffx.224986.1.S1_at pmrna43947 hypothetical protein - 2e-90 At1g17980 nucleotidyltransferase family protein C.G. S.X.
0.02 3e+0 34 Triticum aestivum Ta.635.2.A1_a_at BQ169481 - - 2e-2 At3g22200 POP2 (POLLEN-PISTIL INCOMPATIBILITY 2) C.G. S.X.
0.02 5e+0 32 Zea mays Zm.2293.1.A1_at AW331208 Hypothetical protein LOC100192954 - 8e-1 At4g00100 ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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