CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1615609_at

Gene name hypothetical protein LOC100268043

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 89.5 1615609_at CB971917 hypothetical protein LOC100268043 - 1e-11 At3g25920 RPL15 S.X. H.G.
0.86 95.1 1609228_at CF403419 hypothetical protein LOC100247047 - 9e-5 At2g21385 unknown protein S.X. H.G.
0.82 93.9 1617061_s_at CD003896 hypothetical protein LOC100243475 - 2e-15 At5g55220 trigger factor type chaperone family protein S.X. H.G.
0.71 89.5 1610716_at CF211147 hypothetical protein LOC100265925 - 5e-16 At3g15190 chloroplast 30S ribosomal protein S20, putative S.X. H.G.
0.71 89.5 1614655_at CB969062 hypothetical protein LOC100267459 - 2e-61 At5g45930 CHLI2 (MAGNESIUM CHELATASE I2) S.X. H.G.
0.71 89.5 1606797_at CD714405 similar to 50S ribosomal protein L17, chloroplastic - 3e-8 At3g54210 ribosomal protein L17 family protein S.X. H.G.
0.67 87.9 1620684_at CA811105 hypothetical protein LOC100244408 - 5e-10 At1g64510 ribosomal protein S6 family protein S.X. H.G.
0.53 75.2 1622495_at BM436258 hypothetical protein LOC100248841 - 4e-26 At1g74970 RPS9 (RIBOSOMAL PROTEIN S9) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.4 98.9 GSM147726 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 55
5.9 98.6 GSM147714 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 43
5.1 98.1 GSM147728 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 57
4.6 97.6 GSM147730 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 59
4.6 97.6 GSM147712 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 41
4.5 97.5 GSM147732 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 61
4.5 97.5 GSM147708 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 37
4.3 97.2 GSM147733 Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation 62
4.2 97.1 GSM147720 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 49
4.1 96.9 GSM147727 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 56
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 3e+0 32 1620908_at CD013688 hypothetical protein LOC100247344 - 3e-102 At4g28880 ckl3 (Casein Kinase I-like 3) C.G. S.X.
0.02 3e+0 32 1618550_at CD715311 - - 9e-2 At5g17270 tetratricopeptide repeat (TPR)-containing protein C.G. S.X.
0.02 3e+0 32 1615409_at CB970366 - - 1e+0 At1g35242 unknown protein C.G. S.X.
0.02 3e+0 32 1614737_at CD715311 - - 9e-2 At5g17270 tetratricopeptide repeat (TPR)-containing protein C.G. S.X.
0.02 3e+0 32 1614242_at CF211976 hypothetical protein LOC100243579 - 1e-1 At5g60800 heavy-metal-associated domain-containing protein C.G. S.X.
0.01 3e+0 32 1614128_at CB916225 similar to ubiquitin carrier protein - 5e-82 At1g14400 UBC1 (UBIQUITIN CARRIER PROTEIN 1) C.G. S.X.
0.02 3e+0 32 1613813_a_at CF517294 - - 3e-11 At5g62000 ARF2 (AUXIN RESPONSE FACTOR 2) C.G. S.X.
0.02 3e+0 32 1613354_at CF371915 - - 6e-1 At4g14746 - C.G. S.X.
0.02 1e+1 30 1622577_at CA818014 - - 1e+1 At3g25727 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.30 1e-11 71 Arabidopsis thaliana At3g25920 822189 RPL15 encodes a plastid ribosomal protein CL15, a constituent of the large subunit of the ribosomal complex - - - C.G. S.X.
0.36 2e-50 200 Glycine max Gma.3419.1.S1_at CD392345 - - 4e-17 At3g25920 RPL15 C.G. S.X.
0.02 1e+0 34 Hordeum vulgare Contig24609_at Contig24609 - - 1e+0 At4g01650 - C.G. S.X.
0.03 7e-5 50 Oryza sativa Os03g0219900 AK066527.1 - 50S ribosomal protein L15, chloroplast precursor(CL15) (Fragment) 5e-1 At3g25920 RPL15 C.G. S.X.
0.43 1e-113 410 Populus trichocarpa Ptp.4444.1.S1_at CV254838 hypothetical protein - 2e-16 At3g25920 RPL15 C.G. S.X.
0.03 4e-2 40 Triticum aestivum Ta.16210.1.S1_at CA602674 - - 2e-1 At5g62770 unknown protein C.G. S.X.
0.05 6e-2 38 Zea mays Zm.9118.1.A1_at BM336433 hypothetical protein LOC100273366 - 2e-6 At3g25920 RPL15 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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