Gene omics information

Query gene ID	1615460_at
Gene name	hypothetical protein LOC100249750
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.8	1615460_at	CF405945	hypothetical protein LOC100249750	-	2e-91	At1g06700	serine/threonine protein kinase, putative	S.X.	H.G.	Please select
0.60	81.9	1619845_at	CB918038	hypothetical protein LOC100252548	-	4e-19	At4g33530	KUP5	S.X.	H.G.	Please select
0.55	77.3	1608903_at	CF516993	hypothetical protein LOC100245579	-	9e-10	At3g14100	oligouridylate-binding protein, putative	S.X.	H.G.	Please select
0.44	64.1	1613693_at	BQ796396	hypothetical LOC100255479	-	8e-22	At2g18600	RUB1-conjugating enzyme, putative	S.X.	H.G.	Please select
0.38	53.6	1616109_at	CB348358	hypothetical protein LOC100243947	-	1e-7	At5g25080	-	S.X.	H.G.	Please select
0.32	43.1	1613058_a_at	CF511255	hypothetical protein LOC100250363	-	9e-9	At4g27000	ATRBP45C	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.1	94.6	GSM436363	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436370	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436357	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436381	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436358	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436362	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.2	89.9	GSM436359	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436355	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436385	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.22	1e-12	73	1608103_at	CD801640	hypothetical protein LOC100266523	-	3e-61	At2g47060	serine/threonine protein kinase, putative	C.G.	S.X.	Please select
0.04	2e-8	59	1607382_at	CF404494	hypothetical protein LOC100265884	-	5e-18	At3g62220	serine/threonine protein kinase, putative	C.G.	S.X.	Please select
0.02	4e-6	52	1607675_at	CD011506	hypothetical protein LOC100253466	-	3e-11	At1g07570	APK1A	C.G.	S.X.	Please select
0.02	3e-4	46	1607310_at	BQ798122	hypothetical protein LOC100254358	-	3e-2	At5g14370	-	C.G.	S.X.	Please select
0.03	1e-3	44	1619975_at	CF208647	hypothetical LOC100260256	-	5e-10	At1g72180	leucine-rich repeat transmembrane protein kinase, putative	C.G.	S.X.	Please select
0.03	1e-3	44	1612516_at	CB976044	hypothetical protein LOC100252647	-	8e-9	At4g39400	BRI1 (BRASSINOSTEROID INSENSITIVE 1)	C.G.	S.X.	Please select
0.02	4e-3	42	1617943_at	CF516842	hypothetical LOC100256326	-	7e-22	At1g56130	leucine-rich repeat family protein / protein kinase family protein	C.G.	S.X.	Please select
0.02	1e-2	40	1620076_s_at	CA809762	hypothetical protein LOC100254960	-	6e-15	At1g15270	-	C.G.	S.X.	Please select
0.03	1e-2	40	1619555_at	AY395743.1	hypothetical protein LOC100250154	-	3e-61	At5g02800	protein kinase family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.46	2e-91	337	Arabidopsis thaliana	At1g06700	837180	serine/threonine protein kinase, putative	F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.48	5e-114	412	Glycine max	Gma.10215.1.S1_a_at	AY263347.1	protein kinase Pti1	-	1e-73	At3g59350	serine/threonine protein kinase, putative	C.G.	S.X.	Please select
0.29	7e-49	194	Hordeum vulgare	Contig11925_at	Contig11925	-	-	2e-40	At2g30740	serine/threonine protein kinase, putative	C.G.	S.X.	Please select
0.28	9e-64	246	Oryza sativa	Os03g0844100	AK067164.1	-	Pti1 kinase-like protein	6e-39	At3g59350	serine/threonine protein kinase, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.52	4e-142	506	Populus trichocarpa	PtpAffx.4085.4.S1_at	CV244302	hypothetical protein	-	3e-71	At3g59350	serine/threonine protein kinase, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.28	5e-39	163	Triticum aestivum	Ta.7081.1.S1_at	BE515826	-	-	2e-32	At1g06700	serine/threonine protein kinase, putative	C.G.	S.X.	Please select
0.24	2e-46	186	Zea mays	Zm.4560.1.S1_at	AI734791	Pti1-like kinase-like	-	3e-47	At3g59350	serine/threonine protein kinase, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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