CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1615370_at

Gene name hypothetical protein LOC100266022

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 92.3 1615370_at CF372878 hypothetical protein LOC100266022 - 6e-2 At4g08330 unknown protein S.X. H.G.
0.59 80.6 1611168_at CF208285 hypothetical protein LOC100247366 - 2e-139 At1g50010 TUA2 S.X. H.G.
0.57 79.8 1614794_at CF414317 hypothetical protein LOC100250552 - 1e-30 At4g33400 dem protein-related / defective embryo and meristems protein-related S.X. H.G.
0.56 79.4 1611328_at CF512075 hypothetical protein LOC100257988 - 3e-57 At3g54560 HTA11 S.X. H.G.
0.56 79.4 1615089_at CF512548 hypothetical protein LOC100260443 - 1e-140 At2g29550 TUB7 S.X. H.G.
0.53 75.2 1617030_at CF405162 hypothetical protein LOC100268070 - 3e-22 At4g32830 AtAUR1 (ATAURORA1) S.X. H.G.
0.52 73.9 1607019_at CB922746 hypothetical protein LOC100251940 - 3e+0 At2g41420 proline-rich family protein S.X. H.G.
0.48 68.8 1617668_at CF514659 hypothetical protein LOC100243346 - 5e-4 At4g11080 high mobility group (HMG1/2) family protein S.X. H.G.
0.47 67.7 1616453_at CF510913 hypothetical protein LOC100254782 - 2e-58 At1g76540 CDKB2 S.X. H.G.
0.40 57.7 1612253_at CB970527 hypothetical protein LOC100263987 - 4e+0 At3g61370 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
27.8 100.0 GSM436354 Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
9.1 99.5 GSM436353 Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
8.7 99.5 GSM436360 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
8.3 99.4 GSM436380 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
7.4 99.2 GSM436358 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
6.9 99.1 GSM436377 Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
6.2 98.8 GSM436381 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
6.1 98.7 GSM436379 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
6.0 98.7 GSM436368 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
4.3 97.2 GSM436359 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e-3 40 1619855_at CB920107 - - 1e-1 At2g44745 WRKY family transcription factor C.G. S.X.
0.03 5e-3 40 1607198_at CB920107 - - 1e-1 At2g44745 WRKY family transcription factor C.G. S.X.
0.02 2e-2 38 1611185_at CB978682 hypothetical protein LOC100258822 - 4e-30 At2g41900 zinc finger (CCCH-type) family protein C.G. S.X.
0.03 3e-1 34 1622562_at CD006619 - - 7e-40 At1g79510 unknown protein C.G. S.X.
0.01 3e-1 34 1619097_a_at CF213300 similar to HOG1 (HOMOLOGY-DEPENDENT GENE SILENCING 1); adenosylhomocysteinase - 9e-140 At4g13940 MEE58 (MATERNAL EFFECT EMBRYO ARREST 58) C.G. S.X.
0.02 3e-1 34 1618084_at CF373549 hypothetical protein LOC100266970 - 6e-7 At4g33690 unknown protein C.G. S.X.
0.03 3e-1 34 1617236_at CD006619 hypothetical protein LOC100243255 - 7e-40 At1g79510 unknown protein C.G. S.X.
0.03 3e-1 34 1616371_at CA817327 - - 6e-15 At1g03950 VPS2.3 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2.3) C.G. S.X.
0.01 3e-1 34 1615754_at CF213398 - - 3e-41 At5g65470 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 6e-2 38 Arabidopsis thaliana At4g08330 826387 unknown protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P - - - C.G. S.X.
0.10 4e-7 56 Glycine max Gma.12483.1.A1_at CD393502 - - 6e-1 At1g67950 RNA recognition motif (RRM)-containing protein C.G. S.X.
0.03 2e+0 32 Hordeum vulgare Contig15845_s_at Contig15845 - - 2e-2 At5g66400 RAB18 (RESPONSIVE TO ABA 18) C.G. S.X.
0.03 1e-1 38 Oryza sativa Os10g0577400 AK064295.1 - Conserved hypothetical protein 2e-1 At1g22890 unknown protein C.G. S.X.
0.04 2e-5 50 Populus trichocarpa PtpAffx.71332.1.S1_at CK090492 hypothetical protein - 1e-1 At1g78110 unknown protein C.G. S.X.
0.04 4e-3 42 Triticum aestivum TaAffx.38670.1.S1_at BQ803513 - - 2e-2 At5g50810 TIM8 C.G. S.X.
0.04 2e+0 32 Zea mays ZmAffx.760.1.A1_at AI734521 - - 1e+1 At5g42591 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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