CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1615353_at

Gene name

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.8 1615353_at CB973179 - - 4e-12 At4g04614 unknown protein S.X. H.G.
0.60 81.9 1620902_a_at CD801216 - - 6e-1 At1g67210 proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein S.X. H.G.
0.57 79.8 1617911_at BQ796680 hypothetical protein LOC100247972 - 9e-2 At5g53560 CB5-E (CYTOCHROME B5 ISOFORM E) S.X. H.G.
0.53 75.2 1612278_at CF074615 hypothetical protein LOC100241738 - 7e-1 At5g37380 DNAJ heat shock N-terminal domain-containing protein S.X. H.G.
0.50 72.7 1616660_s_at CF569214.1 similar to 60S ribosomal protein L19 - 1e+0 At4g29960 unknown protein S.X. H.G.
0.36 50.7 1620757_at CF372931 hypothetical protein LOC100260825 - 4e-3 At1g51600 TIFY2A S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.4 99.2 GSM147739 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 68
6.9 99.1 GSM147721 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 50
6.7 99.0 GSM147728 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 57
6.7 99.0 GSM147740 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 69
6.5 98.9 GSM147723 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 52
6.2 98.8 GSM147711 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 40
5.4 98.3 GSM147722 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 51
5.2 98.2 GSM147730 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 59
5.1 98.1 GSM147729 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 58
4.9 97.9 GSM147720 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 49
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 5e-3 40 1616713_at CB339474 - - 2e+1 At5g41490 F-box family protein C.G. S.X.
0.02 3e-1 34 1619464_at CA818609 hypothetical protein LOC100254564 - 3e-11 At1g79160 unknown protein C.G. S.X.
0.02 3e-1 34 1619241_at BQ793371 hypothetical protein LOC100250554 - 3e-37 At4g17900 zinc-binding family protein C.G. S.X.
0.03 1e+0 32 1621997_s_at CF512249 hypothetical protein LOC100259237 - 2e-1 At1g14200 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.03 1e+0 32 1620983_at CF207286 hypothetical protein LOC100267272 - 3e-10 At5g01320 pyruvate decarboxylase, putative C.G. S.X.
0.03 1e+0 32 1619537_at CB970345 - - 1e+0 At3g50200 unknown protein C.G. S.X.
0.03 1e+0 32 1616738_at CB917799 - - 2e-2 At1g22210 trehalose-6-phosphate phosphatase, putative C.G. S.X.
0.02 1e+0 32 1614825_at CF214450 hypothetical protein LOC100257887 - 4e-27 At1g24360 3-oxoacyl-(acyl-carrier protein) reductase, chloroplast / 3-ketoacyl-acyl carrier protein reductase C.G. S.X.
0.02 1e+0 32 1612063_at CB002186 - - 3e+0 At1g77830 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.18 4e-12 71 Arabidopsis thaliana At4g04614 3770064 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPVB - - - C.G. S.X.
0.04 1e+0 34 Glycine max GmaAffx.83794.1.S1_at BU927215 - - 9e-1 At4g02541 unknown protein C.G. S.X.
0.04 5e-1 34 Hordeum vulgare Contig14398_s_at Contig14398 - - 4e-3 At5g43780 APS4 C.G. S.X.
0.07 2e-6 54 Oryza sativa Os06g0630300 AK107079.1 - Conserved hypothetical protein 1e-1 At4g04614 unknown protein C.G. S.X.
0.12 3e-26 119 Populus trichocarpa PtpAffx.157148.1.S1_at BU819865 hypothetical protein - 7e-9 At4g04614 unknown protein C.G. S.X.
0.07 3e-1 36 Triticum aestivum Ta.27696.1.A1_at BJ298921 - - 3e-1 At4g04614 unknown protein C.G. S.X.
0.04 2e+0 32 Zea mays ZmAffx.226.1.A1_at AI670238 - - 1e+1 At5g49710 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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