Gene omics information

Query gene ID	1615292_at
Gene name	similar to oligopeptidase A
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.44	64.1	1615292_at	CF214583	similar to oligopeptidase A	-	1e-37	At5g10540	peptidase M3 family protein / thimet oligopeptidase family protein	S.X.	H.G.	Please select
0.77	92.3	1612831_s_at	CF201533.1	H+-pyrophosphatase	-	5e-9	At1g15690	AVP1	S.X.	H.G.	Please select
0.67	87.9	1612742_s_at	CF372931	hypothetical protein LOC100260825	-	4e-3	At1g51600	TIFY2A	S.X.	H.G.	Please select
0.61	83.2	1622167_at	CB007965	hypothetical protein LOC100249144	-	9e-5	At5g23410	-	S.X.	H.G.	Please select
0.60	81.9	1611783_at	BQ792690	hypothetical protein LOC100262520	-	1e+0	At2g43570	chitinase, putative	S.X.	H.G.	Please select
0.53	75.2	1606673_at	CB005473	hypothetical protein LOC100253524	-	1e-13	At3g10620	ATNUDX26 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 26)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.8	93.4	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.3	90.7	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.2	89.9	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.2	89.9	GSM147683	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	12
2.1	89.1	GSM147693	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	22
2.1	89.1	GSM147680	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	9
2.1	89.1	GSM147674	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	3
2.0	88.2	GSM147679	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	8
2.0	88.2	GSM147681	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	10
1.9	87.2	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.20	1e-7	56	1621980_at	CB003356	-	-	3e-2	At5g10540	peptidase M3 family protein / thimet oligopeptidase family protein	C.G.	S.X.	Please select
0.20	1e-7	56	1618189_at	CB003356	-	-	3e-2	At5g10540	peptidase M3 family protein / thimet oligopeptidase family protein	C.G.	S.X.	Please select
0.02	9e-2	36	1620395_s_at	CF214765	hypothetical protein LOC100263635	-	4e-94	At5g03290	isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative	C.G.	S.X.	Please select
0.02	9e-2	36	1615577_at	CB340193	hypothetical protein LOC100256811	-	4e-92	At5g05170	CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1)	C.G.	S.X.	Please select
0.03	9e-2	36	1609176_at	CF404427	hypothetical protein LOC100247851	-	4e+0	At1g27160	valyl-tRNA synthetase / valine--tRNA ligase-related	C.G.	S.X.	Please select
0.03	9e-2	36	1606830_at	CF201217.1	-	-	4e-22	At3g09810	isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative	C.G.	S.X.	Please select
0.02	4e-1	34	1618940_at	CF212858	hypothetical protein LOC100248516	-	6e-68	At5g62790	DXR (1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE)	C.G.	S.X.	Please select
0.03	1e+0	32	1616747_at	CF205411.1	-	-	1e-15	At4g09012	-	C.G.	S.X.	Please select
0.02	1e+0	32	1612407_at	CF415099	hypothetical protein LOC100248505	-	1e-14	At1g26670	VTI1B	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.11	1e-37	157	Arabidopsis thaliana	At5g10540	830919	peptidase M3 family protein / thimet oligopeptidase family protein	F:metalloendopeptidase activity;P:response to cadmium ion, proteolysis;C:cytosol, apoplast, chloroplast;BOMFPA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.19	5e-50	198	Glycine max	Gma.5903.2.S1_a_at	AW433295	-	-	8e-38	At5g10540	peptidase M3 family protein / thimet oligopeptidase family protein	C.G.	S.X.	Please select
0.13	2e-16	85	Hordeum vulgare	Contig4070_s_at	Contig4070	-	-	4e-22	At5g65620	peptidase M3 family protein / thimet oligopeptidase family protein	C.G.	S.X.	Please select
0.11	5e-17	89	Oryza sativa	Os02g0830100	AK065077.1	-	Oligopeptidase A	7e-24	At5g65620	peptidase M3 family protein / thimet oligopeptidase family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.23	1e-69	264	Populus trichocarpa	Ptp.3296.1.S1_s_at	CV255955	hypothetical protein	-	1e-73	At5g65620	peptidase M3 family protein / thimet oligopeptidase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.15	4e-16	85	Triticum aestivum	Ta.2059.2.S1_a_at	CD896628	-	-	4e-22	At5g65620	peptidase M3 family protein / thimet oligopeptidase family protein	C.G.	S.X.	Please select
0.12	2e-19	95	Zea mays	Zm.3613.1.A1_at	BG841007	hypothetical protein LOC100273532	-	4e-24	At5g10540	peptidase M3 family protein / thimet oligopeptidase family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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