Gene omics information

Query gene ID 1615231_at
Gene name hypothetical protein LOC100254995
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8394.61615231_atCF607773hypothetical protein LOC100254995-1e-19At2g31680AtRABA5d (Arabidopsis Rab GTPase homolog A5d)S.X.H.G.
0.3650.71617454_atBQ798893hypothetical protein LOC100261773-3e+0At3g10700GHMP kinase family proteinS.X.H.G.
0.1819.41608523_atCB339561hypothetical protein LOC100253981-4e+0At5g14340AtMYB40 (myb domain protein 40)S.X.H.G.
0.045.21610794_atCB970276hypothetical protein LOC100254003-2e-46At1g20330SMT2 (STEROL METHYLTRANSFERASE 2)S.X.H.G.
0.034.21607962_atCB973840similar to pentatricopeptide repeat-containing protein At1g32415-7e-12At1g32410vacuolar protein sorting 55 family protein / VPS55 family proteinS.X.H.G.
0.023.21606799_s_atCB968910hypothetical protein LOC100253273 /// hypothetical protein LOC100248145-4e-101At1g04410malate dehydrogenase, cytosolic, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.298.2GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
3.796.2GSM436420V. riparia (VR, PI588259) SD, 13h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
3.796.2GSM436419V. riparia (VR, PI588259) SD, 13h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.993.8GSM147699Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation28
2.591.9GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.491.3GSM147693Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation22
2.390.7GSM436413V. riparia (VR, PI588259) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.289.9GSM147681Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation10
2.289.9GSM299455C_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.189.1GSM147687Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation16
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e-4441619728_atBM437855--1e-35At3g12160RABA4D (RAB GTPASE HOMOLOG A4D)C.G.S.X.
0.044e-4441607044_atBM437855hypothetical protein LOC100246065-1e-35At3g12160RABA4D (RAB GTPASE HOMOLOG A4D)C.G.S.X.
0.052e-2381609466_atCD797661hypothetical protein LOC100262838-3e-61At5g65270AtRABA4a (Arabidopsis Rab GTPase homolog A4a)C.G.S.X.
0.031e-1361610906_atCD009181--2e-24At3g21300RNA methyltransferase family proteinC.G.S.X.
0.031e-1361607057_atCD009181hypothetical protein LOC100261689-2e-24At3g21300RNA methyltransferase family proteinC.G.S.X.
0.034e-1341609543_atCB348420hypothetical protein LOC100263184-2e-105At4g17170RABB1C (ARABIDOPSIS RAB GTPASE HOMOLOG B1C)C.G.S.X.
0.034e-1341609237_atCF205706.1--3e-1At1g15800unknown proteinC.G.S.X.
0.022e+0321622493_atCF208434hypothetical protein LOC100257695-9e-11At3g18000XPL1 (XIPOTL 1)C.G.S.X.
0.012e+0321621283_atAF257777.1H+-pyrophosphatase-1e-93At1g15690AVP1C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.531e-1997Arabidopsis thalianaAt2g31680817724AtRABA5d (Arabidopsis Rab GTPase homolog A5d)F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:unknown;MOFPBVA---C.G.S.X.
0.524e-38159Glycine maxGma.16259.1.S1_atBQ628291--2e-37At2g43130ARA4C.G.S.X.
0.193e-49194Hordeum vulgareContig10901_atContig10901--1e-29At2g43130ARA4C.G.S.X.
0.211e-48194Oryza sativaOs08g0525000AK103220.1-Ras GTPase family protein1e-41At2g43130ARA4C.G.S.X.
0.534e-26119Populus trichocarpaPtp.1488.1.S1_a_atCV243292hypothetical protein-8e-34At2g31680AtRABA5d (Arabidopsis Rab GTPase homolog A5d)C.G.S.X.
0.144e-47188Triticum aestivumTa.1396.1.S1_atCK165775--9e-22At1g05810RABA5E (RAB GTPASE HOMOLOG A5E)C.G.S.X.
0.271e-51202Zea maysZm.4048.1.S1_atAW091504ras-related protein ARA-4-5e-35At2g43130ARA4C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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