Gene omics information

Query gene ID	1615166_at
Gene name
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.69	88.3	1615166_at	CB917504	-	-	3e+0	At3g51020	unknown protein	S.X.	H.G.	Please select
0.75	91.3	1612031_at	CF413741	nhx1 antiporter	-	4e-1	At4g12060	Clp amino terminal domain-containing protein	S.X.	H.G.	Please select
0.70	88.6	1612181_at	CF518786	hypothetical protein LOC100241990	-	7e-6	At4g14100	transferase, transferring glycosyl groups	S.X.	H.G.	Please select
0.64	84.7	1617750_at	CB005665	-	-	3e-20	At5g35180	phosphoinositide binding	S.X.	H.G.	Please select
0.60	81.9	1614416_at	CD013543	hypothetical protein LOC100244960	-	8e-6	At5g58900	myb family transcription factor	S.X.	H.G.	Please select
0.55	77.3	1607101_s_at	CF603353	hypothetical protein LOC100245611	-	2e-67	At3g11830	chaperonin, putative	S.X.	H.G.	Please select
0.54	75.7	1622090_at	CD801504	hypothetical protein LOC100260385	-	1e+0	At5g40370	glutaredoxin, putative	S.X.	H.G.	Please select
0.52	73.9	1620480_at	BQ793426	hypothetical protein LOC100266309	-	4e-1	At3g51325	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.49	69.3	1611257_a_at	CB976439	hypothetical protein LOC100250923	-	3e-21	At5g08100	L-asparaginase / L-asparagine amidohydrolase	S.X.	H.G.	Please select
0.48	68.8	1610617_at	CB916396	hypothetical protein LOC100258419	-	6e-3	At2g41475	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
15.3	99.9	GSM287875	Green hard berry C17 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
10.5	99.7	GSM287877	Green hard berry B12 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
10.4	99.7	GSM287879	Green hard berry C19 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
9.9	99.6	GSM287886	Green soft berry C22 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
8.6	99.5	GSM287888	Green soft berry C24 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
7.8	99.3	GSM287895	Pink soft berry B13 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
7.2	99.1	GSM287882	Green soft berry A21 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
7.1	99.1	GSM287896	Pink soft berry C27 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
6.6	98.9	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
6.3	98.8	GSM287893	Pink soft berry C12 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.99	0	686	1611384_at	CB917504	hypothetical protein LOC100244040	-	3e+0	At3g51020	unknown protein	C.G.	S.X.	Please select
0.04	6e-2	36	1609308_at	CF603016	-	-	2e+0	At4g03380	-	C.G.	S.X.	Please select
0.04	2e-1	34	1618559_at	CF515423	hypothetical protein LOC100243779	-	2e-5	At1g44910	protein binding	C.G.	S.X.	Please select
0.03	2e-1	34	1612300_at	CD719418	-	-	3e-1	At2g01800	COP1-interacting protein-related	C.G.	S.X.	Please select
0.03	2e-1	34	1608506_at	CD719418	-	-	3e-1	At2g01800	COP1-interacting protein-related	C.G.	S.X.	Please select
0.03	9e-1	32	1622773_at	CF605812	hypothetical protein LOC100253381	-	2e-2	At4g15975	protein binding / zinc ion binding	C.G.	S.X.	Please select
0.02	9e-1	32	1616564_at	CB979976	-	-	4e-42	At3g26618	ERF1-3 (eukaryotic release factor 1-3)	C.G.	S.X.	Please select
0.02	9e-1	32	1607256_s_at	CB979976	-	-	4e-42	At3g26618	ERF1-3 (eukaryotic release factor 1-3)	C.G.	S.X.	Please select
0.04	4e+0	30	1618901_at	CF214125	-	-	2e-21	At2g33770	PHO2 (PHOSPHATE 2)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	3e+0	32	Arabidopsis thaliana	At3g51020	824266	unknown protein	F:unknown;P:unknown;C:cellular_component unknown;PM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	34	Glycine max	GmaAffx.24206.1.S1_at	BQ741622	-	-	2e-1	At1g67640	lysine and histidine specific transporter, putative	C.G.	S.X.	Please select
0.04	1e+0	32	Hordeum vulgare	EBro03_SQ004_E10_at	EBro03_SQ004_E10	-	-	3e+0	At4g20290	unknown protein	C.G.	S.X.	Please select
0.04	6e+0	32	Oryza sativa	Os12g0622600	9640.m04204	-	-	2e+0	At4g13670	PTAC5 (PLASTID TRANSCRIPTIONALLY ACTIVE5)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	4e+0	32	Populus trichocarpa	PtpAffx.79568.1.S1_at	BU808959	-	-	1e-1	At5g46490	disease resistance protein (TIR-NBS class), putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	3e+0	32	Triticum aestivum	TaAffx.82986.1.S1_at	CA663862	-	-	2e-1	At4g30260	integral membrane Yip1 family protein	C.G.	S.X.	Please select
0.04	3e-1	34	Zea mays	Zm.6244.2.S1_at	AI677548	-	-	8e-1	At2g43350	ATGPX3 (GLUTATHIONE PEROXIDASE 3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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