Gene omics information

Query gene ID	1615149_at
Gene name	hypothetical protein LOC100248175
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.8	1615149_at	CD009120	hypothetical protein LOC100248175	-	4e+0	At5g64200	ATSC35	S.X.	H.G.	Please select
0.67	87.9	1620133_at	CA816897	hypothetical protein LOC100256241	-	3e-2	At4g13220	unknown protein	S.X.	H.G.	Please select
0.61	83.2	1607055_at	CB004334	hypothetical protein LOC100264430	-	2e-2	At1g44790	ChaC-like family protein	S.X.	H.G.	Please select
0.55	77.3	1611605_s_at	CF371905	hypothetical protein LOC100257686	-	2e-3	At2g31050	plastocyanin-like domain-containing protein	S.X.	H.G.	Please select
0.50	72.7	1607640_at	CF215061	hypothetical protein LOC100249595	-	1e-19	At1g65260	PTAC4 (PLASTID TRANSCRIPTIONALLY ACTIVE4)	S.X.	H.G.	Please select
0.43	61.5	1611683_s_at	BQ799199	similar to A_IG002N01.31 gene product	-	1e-30	At4g01050	hydroxyproline-rich glycoprotein family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.4	97.3	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47
4.1	96.9	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48
3.9	96.6	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
3.6	96.0	GSM147737	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	66
3.6	96.0	GSM147715	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	44
3.5	95.7	GSM147733	Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation	62
3.5	95.7	GSM147736	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	65
3.3	95.2	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
3.3	95.2	GSM147732	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	61
3.2	94.9	GSM147730	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	59

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	1140	1618953_at	CD009120	-	-	4e+0	At5g64200	ATSC35	C.G.	S.X.	Please select
0.02	3e-1	34	1619077_at	CF513582	hypothetical protein LOC100256889	-	1e-60	At1g56330	ATSAR1B (SECRETION-ASSOCIATED RAS 1 B)	C.G.	S.X.	Please select
0.03	1e+0	32	1620948_at	CF609843	-	-	2e-2	At2g27750	nucleolar matrix protein-related	C.G.	S.X.	Please select
0.02	1e+0	32	1618901_at	CF214125	-	-	2e-21	At2g33770	PHO2 (PHOSPHATE 2)	C.G.	S.X.	Please select
0.01	1e+0	32	1618705_s_at	AF236127.1	catalase /// hypothetical protein LOC100242769	-	2e-82	At4g35090	CAT2 (CATALASE 2)	C.G.	S.X.	Please select
0.02	1e+0	32	1617576_at	CF516601	-	-	6e-4	At4g15955	epoxide hydrolase-related	C.G.	S.X.	Please select
0.03	1e+0	32	1617185_at	CB005635	hypothetical protein LOC100263152	-	2e-2	At2g27750	nucleolar matrix protein-related	C.G.	S.X.	Please select
0.01	1e+0	32	1616918_s_at	CB345541	hypothetical protein LOC100263871	-	5e-132	At2g39730	RCA (RUBISCO ACTIVASE)	C.G.	S.X.	Please select
0.03	1e+0	32	1612120_at	CD718075	-	-	3e-1	At5g53490	thylakoid lumenal 17.4 kDa protein, chloroplast	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	4e+0	32	Arabidopsis thaliana	At5g64200	836541	ATSC35	encodes an SC35-like splicing factor of 35 kD localized to the nuclear specks.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.25	1e-10	67	Glycine max	GmaAffx.22107.1.S1_at	BF069011	-	-	3e-22	At3g63510	FAD binding / catalytic/ tRNA dihydrouridine synthase	C.G.	S.X.	Please select
0.03	2e+0	32	Hordeum vulgare	Contig21293_at	Contig21293	-	-	3e-1	At5g17150	-	C.G.	S.X.	Please select
0.03	2e+0	34	Oryza sativa	OsAffx.7154.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.09	3e-8	59	Populus trichocarpa	PtpAffx.49612.1.A1_at	CV278000	hypothetical protein	-	1e-35	At3g63510	FAD binding / catalytic/ tRNA dihydrouridine synthase	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e+0	34	Triticum aestivum	TaAffx.40674.1.A1_at	CA693429	-	-	4e+0	At2g04830	F-box family protein	C.G.	S.X.	Please select
0.03	5e-1	34	Zea mays	Zm.17641.1.S1_at	CK368556	-	-	1e+0	At3g62470	pentatricopeptide (PPR) repeat-containing protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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