Gene omics information

Query gene ID 1615135_at
Gene name
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.81615135_atCD797887--1e+1At5g41992CPuORF58 (Conserved peptide upstream open reading frame 58)S.X.H.G.
0.1718.21610127_atCB920325--1e-1At3g15355UBC25 (UBIQUITIN-CONJUGATING ENZYME 25)S.X.H.G.
0.045.21619392_atCF513478hypothetical protein LOC100259847-4e+0At3g24060self-incompatibility protein-relatedS.X.H.G.
0.034.21618242_atCF512932--1e+0At4g29660EMB2752 (EMBRYO DEFECTIVE 2752)S.X.H.G.
0.012.11611921_atCF210910hypothetical protein LOC100262620-8e-11At4g17570zinc finger (GATA type) family proteinS.X.H.G.
0.012.11613353_atCA809236hypothetical protein LOC100265492-4e-86At4g01370ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.799.7GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
6.799.0GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
6.698.9GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
6.098.7GSM436350Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
5.598.4GSM436369Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
5.298.2GSM299452B_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.997.9GSM436363Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
4.997.9GSM436387Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
4.897.8GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infection
4.397.2GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-1341621083_atCF511394--2e-1At3g63088RTFL14 (ROTUNDIFOLIA LIKE 14)C.G.S.X.
0.033e-1341614533_atCD714601--1e+0At3g48880F-box family proteinC.G.S.X.
0.033e-1341610763_atCD714601hypothetical protein LOC100263330-1e+0At3g48880F-box family proteinC.G.S.X.
0.031e+0321621715_atCD721690--5e+0At5g09463CPuORF41 (Conserved peptide upstream open reading frame 41)C.G.S.X.
0.021e+0321611643_atCF519104hypothetical protein LOC100247789-2e+0At5g06790unknown proteinC.G.S.X.
0.031e+0321609127_atCD721690--5e+0At5g09463CPuORF41 (Conserved peptide upstream open reading frame 41)C.G.S.X.
0.044e+0301622577_atCA818014--1e+1At3g25727unknown proteinC.G.S.X.
0.014e+0301620296_atCF414668hypothetical protein LOC100266601-5e-2At1g66130oxidoreductase N-terminal domain-containing proteinC.G.S.X.
0.034e+0301618580_atCD721169--1e+0At5g66005Expressed proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e+130Arabidopsis thalianaAt5g419926241156CPuORF58 (Conserved peptide upstream open reading frame 58)Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF58 represents a conserved upstream opening reading frame relative to major ORF AT5G41990.1---C.G.S.X.
0.041e+034Glycine maxGmaAffx.80224.1.S1_atAW395987--2e+0At1g52900disease resistance protein (TIR class), putativeC.G.S.X.
0.042e+032Hordeum vulgareHW09B15u_atHW09B15u--3e+0At3g44210unknown proteinC.G.S.X.
0.047e+032Oryza sativaOs06g01805019634.m00759--3e+0At3g49580LSU1 (RESPONSE TO LOW SULFUR 1)C.G.S.X.
0.035e+032Populus trichocarpaPtpAffx.225177.1.S1_x_atpmrna44324hypothetical protein-9e-1At1g17147-C.G.S.X.
0.031e+034Triticum aestivumTa.20790.2.S1_atCA620153--3e-1At3g27080TOM20-3 (TRANSLOCASE OF OUTER MEMBRANE 20 KDA SUBUNIT 3)C.G.S.X.
0.036e+030Zea maysZm.4686.1.S1_atBE510475--3e-1At1g51090heavy-metal-associated domain-containing proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage