Gene omics information

Query gene ID	1615122_at
Gene name	hypothetical protein LOC100249224
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.87	95.2	1615122_at	CF214628	hypothetical protein LOC100249224	-	2e-115	At3g10660	CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2)	S.X.	H.G.	Please select
0.52	73.9	1614599_at	CF513204	hypothetical protein LOC100248579	-	1e-25	At4g01810	protein transport protein-related	S.X.	H.G.	Please select
0.46	66.5	1622571_at	CB970577	hypothetical protein LOC100255631	-	3e-11	At2g21230	bZIP family transcription factor	S.X.	H.G.	Please select
0.44	64.1	1616450_at	BQ797532	hypothetical protein LOC100264578	-	3e-23	At1g48790	mov34 family protein	S.X.	H.G.	Please select
0.40	57.7	1614555_at	CF518554	hypothetical protein LOC100254478	-	2e-13	At5g45300	BMY2 (BETA-AMYLASE 2)	S.X.	H.G.	Please select
0.38	53.6	1613364_at	CD720561	hypothetical protein LOC100254952	-	3e-71	At3g14270	phosphatidylinositol-4-phosphate 5-kinase family protein	S.X.	H.G.	Please select
0.38	53.6	1613515_at	CA809086	hypothetical protein LOC100257134	-	2e-1	At2g24070	unknown protein	S.X.	H.G.	Please select
0.36	50.7	1608302_at	BQ792683	hypothetical protein LOC100253708	-	4e-3	At4g26750	hydroxyproline-rich glycoprotein family protein	S.X.	H.G.	Please select
0.35	48.5	1610376_at	CB922451	hypothetical protein LOC100241274	-	8e-6	At5g65540	unknown protein	S.X.	H.G.	Please select
0.34	46.8	1620828_at	CB976899	hypothetical protein LOC100260245	-	6e-6	At5g12370	SEC10 (EXOCYST COMPLEX COMPONENT SEC10)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.6	98.4	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
4.0	96.7	GSM436350	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
4.0	96.7	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
4.0	96.7	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.4	95.5	GSM436413	V. riparia (VR, PI588259) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.3	95.2	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.3	95.2	GSM436362	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.3	95.2	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM436351	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436392	V. riparia (VR, PI588259) LD, 15h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.08	8e-10	63	1621772_at	CD005226	hypothetical protein LOC100253693	-	7e-20	At2g17290	CPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)	C.G.	S.X.	Please select
0.09	8e-4	44	1610635_at	CF214231	similar to calcium-dependent protein kinase	-	2e-12	At1g35670	ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2)	C.G.	S.X.	Please select
0.07	3e-3	42	1618615_s_at	CF211026	-	-	6e-104	At3g51850	CPK13	C.G.	S.X.	Please select
0.01	5e-2	38	1614834_at	BQ794614	vacuolar pyrophosphatase	-	5e-156	At1g15690	AVP1	C.G.	S.X.	Please select
0.04	5e-2	38	1608730_at	CF568993	-	-	6e-73	At3g51850	CPK13	C.G.	S.X.	Please select
0.01	7e-1	34	1620848_at	CD013192	-	-	3e-15	At3g03440	armadillo/beta-catenin repeat family protein	C.G.	S.X.	Please select
0.01	7e-1	34	1616508_at	CF372645	hypothetical protein LOC100246705	-	1e-4	At5g62390	ATBAG7 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 7)	C.G.	S.X.	Please select
0.02	7e-1	34	1608150_at	BQ792850	-	-	2e-3	At4g32520	SHM3 (SERINE HYDROXYMETHYLTRANSFERASE 3)	C.G.	S.X.	Please select
0.01	7e-1	34	1606665_s_at	CD013192	hypothetical protein LOC100241519	-	3e-15	At3g03440	armadillo/beta-catenin repeat family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.43	2e-115	416	Arabidopsis thaliana	At3g10660	820235	CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2)	predicted to encode calcium-dependent protein kinase and is localized to the ER. Protein is myristoylated in a cell-free extract. Changing the proposed myristoylated site, G residue in the amino terminal, to A prevented the meristoylation . The G to A mutation decreased AtCPK2 membrane association by approximately 50%.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.60	0	767	Glycine max	Gma.13033.2.S1_at	BU545113	-	-	3e-92	At5g04870	CPK1 (CALCIUM DEPENDENT PROTEIN KINASE 1)	C.G.	S.X.	Please select
0.33	4e-25	115	Hordeum vulgare	Contig10960_at	Contig10960	-	-	8e-3	At5g23580	CDPK9 (CALMODULIN-LIKE DOMAIN PROTEIN KINASE 9)	C.G.	S.X.	Please select
0.27	9e-54	212	Oryza sativa	Os03g0789000	9631.m05646	-	Calmodulin-domain protein kinase CDPK isoform 2(Calmodulin-domain protein kinase CDPK isoform 213089-15758) (Calcium-dependent protein kinase isoform 2)	7e-20	At5g04870	CPK1 (CALCIUM DEPENDENT PROTEIN KINASE 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.55	0	726	Populus trichocarpa	PtpAffx.13732.1.S1_s_at	CK090049	calcium dependent protein kinase 1	-	1e-60	At5g04870	CPK1 (CALCIUM DEPENDENT PROTEIN KINASE 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	7e-7	56	Triticum aestivum	Ta.6350.3.S1_a_at	BJ235492	calcium-dependent protein kinase /// calcium-dependent protein kinase	-	3e-7	At1g35670	ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2)	C.G.	S.X.	Please select
0.18	2e-11	69	Zea mays	Zm.12524.1.A1_at	AI712049	-	-	1e-1	At4g38230	CPK26	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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