Gene omics information

Query gene ID	1615118_at
Gene name	hypothetical protein LOC100241584
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.76	91.5	1615118_at	CF373171	hypothetical protein LOC100241584	-	1e+0	At4g36620	zinc finger (GATA type) family protein	S.X.	H.G.	Please select
0.91	98.8	1615603_at	CB346190	-	-	2e-1	At5g11770	NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial	S.X.	H.G.	Please select
0.80	93.6	1619772_at	CF205273.1	hypothetical protein LOC100260458	-	2e+0	At3g05070	-	S.X.	H.G.	Please select
0.80	93.6	1617280_s_at	CF373668	hypothetical protein LOC100258720	-	5e-3	At2g27385	unknown protein	S.X.	H.G.	Please select
0.79	92.7	1611748_s_at	CB969590	similar to PDF	-	1e-1	At2g42840	PDF1 (PROTODERMAL FACTOR 1)	S.X.	H.G.	Please select
0.76	91.5	1613573_at	CF609267	hypothetical protein LOC100260045	-	6e-33	At1g53860	remorin family protein	S.X.	H.G.	Please select
0.76	91.5	1607851_at	CF415102	hypothetical protein LOC100266538	-	9e-2	At1g04660	glycine-rich protein	S.X.	H.G.	Please select
0.75	91.3	1615124_at	CF514122	hypothetical protein LOC100258563	-	8e-5	At1g71691	GDSL-motif lipase/hydrolase family protein	S.X.	H.G.	Please select
0.74	91.0	1609418_s_at	CF568955	hypothetical protein LOC100246054 /// hypothetical protein LOC100255543 /// hypothetical protein LOC100258516 /// hypothetical protein LOC100261331 /// hypothetical protein LOC100266538	-	4e+0	At5g35375	unknown protein	S.X.	H.G.	Please select
0.74	91.0	1613074_at	CB969590	similar to PDF	-	1e-1	At2g42840	PDF1 (PROTODERMAL FACTOR 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.9	99.1	GSM436359	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
5.9	98.6	GSM436400	V. riparia (VR, PI588259) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
5.4	98.3	GSM436402	V. riparia (VR, PI588259) LD, 15h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
5.4	98.3	GSM436362	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
5.4	98.3	GSM436358	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
5.3	98.2	GSM436383	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
5.1	98.1	GSM436397	V. riparia (VR, PI588259) LD, 15h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
5.1	98.1	GSM436398	V. riparia (VR, PI588259) LD, 15h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
4.8	97.8	GSM436363	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
4.3	97.2	GSM436361	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e-1	34	1621497_at	CB971307	hypothetical protein LOC100242262	-	2e-3	At1g72770	HAB1 (HOMOLOGY TO ABI1)	C.G.	S.X.	Please select
0.03	3e-1	34	1619684_at	CD715182	-	-	1e-10	At1g49050	aspartyl protease family protein	C.G.	S.X.	Please select
0.03	3e-1	34	1614861_at	CD715182	hypothetical protein LOC100261096	-	1e-10	At1g49050	aspartyl protease family protein	C.G.	S.X.	Please select
0.03	1e+0	32	1615199_at	BQ794683	-	-	8e-38	At4g08920	CRY1 (CRYPTOCHROME 1)	C.G.	S.X.	Please select
0.03	1e+0	32	1611424_at	CF209697	-	-	9e-1	At2g26680	-	C.G.	S.X.	Please select
0.02	5e+0	30	1622361_s_at	BQ799757	similar to cyclase	-	9e-31	At4g35220	cyclase family protein	C.G.	S.X.	Please select
0.03	5e+0	30	1621024_at	CF206017.1	-	-	3e-23	At4g35220	cyclase family protein	C.G.	S.X.	Please select
0.03	5e+0	30	1620404_at	CF203552.1	-	-	2e-36	At3g11830	chaperonin, putative	C.G.	S.X.	Please select
0.03	5e+0	30	1619582_at	CF203396.1	hypothetical protein LOC100257516	-	1e+0	At5g11330	monooxygenase family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e+0	34	Arabidopsis thaliana	At4g36620	829814	zinc finger (GATA type) family protein	F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;FPMO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	3e-1	36	Glycine max	Gma.17944.1.S1_at	AW570024	-	-	7e-24	At3g15540	IAA19 (INDOLE-3-ACETIC ACID INDUCIBLE 19)	C.G.	S.X.	Please select
0.04	2e+0	32	Hordeum vulgare	Contig10316_s_at	Contig10316	-	-	9e-1	At2g38690	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	34	Oryza sativa	Os07g0102500	AK100796.1	-	Lupus La protein family protein	1e-5	At3g19090	RNA-binding protein, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	5e+0	32	Populus trichocarpa	PtpAffx.220786.1.S1_at	pmrna37218	hypothetical protein	-	2e+0	At5g54600	50S ribosomal protein L24, chloroplast (CL24)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	4e+0	32	Triticum aestivum	TaAffx.98094.1.A1_at	BQ168673	-	-	9e-1	At1g54930	zinc knuckle (CCHC-type) family protein	C.G.	S.X.	Please select
0.03	4e-1	34	Zea mays	Zm.5490.2.A1_x_at	CA830271	hypothetical protein LOC100272755	-	9e-1	At5g22360	ATVAMP714 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 714)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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