CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1615115_at

Gene name hypothetical protein LOC100244778

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.32 43.1 1615115_at CD801173 hypothetical protein LOC100244778 - 1e-38 At5g05080 UBC22 (ubiquitin-conjugating enzyme 22) S.X. H.G.
0.80 93.6 1609772_at CF511919 hypothetical protein LOC100246247 - 3e-1 At3g56880 VQ motif-containing protein S.X. H.G.
0.73 90.8 1613050_at CB971087 hypothetical protein LOC100248215 - 5e-4 At1g20470 auxin-responsive family protein S.X. H.G.
0.61 83.2 1606978_s_at CF207835 hypothetical protein LOC100242245 - 5e-1 At1g16680 DNAJ heat shock N-terminal domain-containing protein / S-locus protein, putative S.X. H.G.
0.57 79.8 1607831_at BQ799075 hypothetical protein LOC100249242 - 8e-7 At3g03950 protein binding S.X. H.G.
0.53 75.2 1620268_at CF517017 - - 2e-1 At5g61630 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.9 96.6 GSM436348 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.7 96.2 GSM436346 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.5 95.7 GSM436354 Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.4 95.5 GSM436381 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.1 94.6 GSM436388 V. riparia (VR, PI588259) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.0 94.2 GSM436379 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM436360 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM436389 V. riparia (VR, PI588259) LD, 15h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.8 93.4 GSM436380 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.7 93.0 GSM436368 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e-2 38 1622584_at CF206482.1 hypothetical protein LOC100248604 - 3e-26 At2g16740 UBC29 (ubiquitin-conjugating enzyme 29) C.G. S.X.
0.02 1e-1 36 1620760_s_at CB339602 hypothetical protein LOC100254474 - 6e-16 At4g16430 basic helix-loop-helix (bHLH) family protein C.G. S.X.
0.02 4e-1 34 1616995_at CB976742 - - 2e-22 At5g41340 UBC4 (UBIQUITIN CONJUGATING ENZYME 4) C.G. S.X.
0.03 4e-1 34 1611552_at CB980533 hypothetical protein LOC100246456 - 4e-3 At5g24090 acidic endochitinase (CHIB1) C.G. S.X.
0.02 2e+0 32 1617703_at CF201457.1 - - 4e-4 At4g30960 SIP3 (SOS3-INTERACTING PROTEIN 3) C.G. S.X.
0.01 2e+0 32 1611503_s_at CB969228 hypothetical protein LOC100241657 - 4e-6 At5g10930 CIPK5 (CBL-INTERACTING PROTEIN KINASE 5) C.G. S.X.
0.02 2e+0 32 1609166_at CF517180 hypothetical protein LOC100249305 - 7e-3 At3g14630 CYP72A9 C.G. S.X.
0.03 2e+0 32 1608835_a_at CF518085 - - 6e+0 At1g56280 ATDI19 C.G. S.X.
0.02 2e+0 32 1608084_x_at CF201457.1 - - 4e-4 At4g30960 SIP3 (SOS3-INTERACTING PROTEIN 3) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.36 1e-38 161 Arabidopsis thaliana At5g05080 830390 UBC22 (ubiquitin-conjugating enzyme 22) F:ubiquitin-protein ligase activity;P:ubiquitin-dependent protein catabolic process;C:cellular_component unknown;MFOPV - - - C.G. S.X.
0.20 1e-23 111 Glycine max Gma.5718.3.S1_a_at BU763515 - - 3e-29 At5g05080 UBC22 (ubiquitin-conjugating enzyme 22) C.G. S.X.
0.20 2e-10 65 Hordeum vulgare Contig10797_at Contig10797 - - 2e-9 At5g05080 UBC22 (ubiquitin-conjugating enzyme 22) C.G. S.X.
0.17 9e-16 85 Oryza sativa Os06g0660700 AK058614.1 - Ubiquitin-conjugating enzyme E2S (EC 6.3.2.19)(Ubiquitin-conjugating enzyme E2-24 kDa)(Ubiquitin-protein ligase) (Ubiquitin carrier protein)(E2-EPF5) 1e-17 At5g05080 UBC22 (ubiquitin-conjugating enzyme 22) C.G. S.X.
0.23 4e-45 182 Populus trichocarpa Ptp.4143.1.S1_s_at CV254486 hypothetical protein - 4e-61 At5g05080 UBC22 (ubiquitin-conjugating enzyme 22) C.G. S.X.
0.16 1e-7 57 Triticum aestivum Ta.3661.1.A1_s_at BJ219797 - - 8e-16 At5g05080 UBC22 (ubiquitin-conjugating enzyme 22) C.G. S.X.
0.27 3e-18 91 Zea mays Zm.6927.2.S1_at CF038958 Hypothetical protein LOC100194137 - 1e-20 At5g05080 UBC22 (ubiquitin-conjugating enzyme 22) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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