CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1615083_at

Gene name

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.8 1615083_at CB914242 - - 1e-38 At4g24060 Dof-type zinc finger domain-containing protein S.X. H.G.
0.43 61.5 1618119_at CB982784 hypothetical protein LOC100257637 - 4e+0 At4g14420 lesion inducing protein-related S.X. H.G.
0.29 37.7 1616235_s_at CA813043 hypothetical protein LOC100240921 - 4e-9 At2g04845 GCN5-related N-acetyltransferase (GNAT) family protein S.X. H.G.
0.14 14.4 1614471_at BQ792249 hypothetical protein LOC100245854 - 6e+0 At5g26594 ARR24 (Arabidopsis response regulator 24) S.X. H.G.
0.07 7.8 1618553_at CF209161 similar to protein kinase family protein - 1e-2 At2g32850 protein kinase family protein S.X. H.G.
0.05 6.0 1617007_at BQ792400 hypothetical protein LOC100267570 - 4e-31 At1g80620 ribosomal protein S15 family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.4 98.9 GSM436428 V. riparia (VR, PI588259) SD, 13h 42 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
6.2 98.8 GSM436427 V. riparia (VR, PI588259) SD, 13h 42 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
5.1 98.1 GSM436403 V. riparia (VR, PI588259) LD, 15h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.5 97.5 GSM436424 V. riparia (VR, PI588259) SD, 13h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.2 97.1 GSM436423 V. riparia (VR, PI588259) SD, 13h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.9 96.6 GSM436401 V. riparia (VR, PI588259) LD, 15h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.8 96.4 GSM436388 V. riparia (VR, PI588259) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.8 96.4 GSM287899 Red soft berry C13 from plant 1 cluster proximal position, biological rep 2 GSE11406 Expression data in individual grape berries during ripening initation
3.4 95.5 GSM436429 V. riparia (VR, PI588259) SD, 13h 42 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.3 95.2 GSM436389 V. riparia (VR, PI588259) LD, 15h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.91 0 1001 1611313_at CB914242 hypothetical protein LOC100263781 - 1e-38 At4g24060 Dof-type zinc finger domain-containing protein C.G. S.X.
0.03 2e-3 42 1611645_at CB349661 hypothetical protein LOC100252175 - 4e-1 At1g11360 universal stress protein (USP) family protein C.G. S.X.
0.02 1e-1 36 1607846_at CF208499 - - 2e-10 At2g42610 LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10) C.G. S.X.
0.02 5e-1 34 1619938_at CF514664 hypothetical protein LOC100254408 - 2e-1 At3g51950 zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein C.G. S.X.
0.02 5e-1 34 1614967_at CF510752 - - 1e+0 At5g01610 unknown protein C.G. S.X.
0.02 5e-1 34 1612785_at CF515439 hypothetical protein LOC100254926 - 6e-31 At2g42610 LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10) C.G. S.X.
0.03 5e-1 34 1612471_at AY427176.1 - - 6e-1 At2g33440 splicing factor family protein C.G. S.X.
0.03 5e-1 34 1608699_at AY427176.1 - - 6e-1 At2g33440 splicing factor family protein C.G. S.X.
0.01 5e-1 34 1607807_s_at CD801516 hypothetical protein LOC100255985 - 4e-21 At5g10960 CCR4-NOT transcription complex protein, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.17 1e-38 161 Arabidopsis thaliana At4g24060 828506 Dof-type zinc finger domain-containing protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:cellular_component unknown;OPMFB - - - C.G. S.X.
0.23 1e-33 145 Glycine max Gma.4766.2.S1_at BG653183 Dof21 - 1e-16 At4g24060 Dof-type zinc finger domain-containing protein C.G. S.X.
0.04 2e-1 36 Hordeum vulgare HF21N04r_at HF21N04r - - 2e+0 At4g19150 ankyrin repeat family protein C.G. S.X.
0.06 2e-7 57 Oryza sativa OsAffx.14985.1.A1_at - - - 0 C.G. S.X.
0.22 1e-42 174 Populus trichocarpa PtpAffx.202279.1.S1_s_at pmrna4561 hypothetical protein - 4e-22 At3g61850 DAG1 (dof affecting germination 1) C.G. S.X.
0.06 2e-9 63 Triticum aestivum TaAffx.90100.1.S1_at CA708031 - - 2e-9 At5g65590 Dof-type zinc finger domain-containing protein C.G. S.X.
0.04 5e-8 57 Zea mays Zm.9762.1.A1_at CF629937 hypothetical protein LOC100277958 - 3e-11 At3g45610 Dof-type zinc finger domain-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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