CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1615073_at

Gene name GAGA-binding transcriptional activator BBR/BPC6-like

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.44 64.1 1615073_at CD798908 GAGA-binding transcriptional activator BBR/BPC6-like - 1e-40 At5g42520 ATBPC6 S.X. H.G.
0.80 93.6 1609850_at CB979570 hypothetical protein LOC100244857 - 3e-7 At1g76510 ARID/BRIGHT DNA-binding domain-containing protein S.X. H.G.
0.73 90.8 1611616_at CF406000 hypothetical protein LOC100250213 - 8e-12 At2g30530 unknown protein S.X. H.G.
0.67 87.9 1609948_at BQ793462 hypothetical protein LOC100259405 - 3e-1 At3g21710 unknown protein S.X. H.G.
0.59 80.6 1614891_s_at BQ792530 hypothetical protein LOC100251643 - 2e-25 At3g56680 nucleic acid binding S.X. H.G.
0.38 53.6 1621094_s_at CF214762 similar to AT4g27960 - 1e-72 At5g41700 UBC8 (UBIQUITIN CONJUGATING ENZYME 8) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
2.9 93.8 GSM322368 genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2 GSE12842 Gene expression in grapevine in response to Bois noir infection
2.8 93.4 GSM436372 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.8 93.4 GSM436371 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.6 92.5 GSM436404 V. riparia (VR, PI588259) LD, 15h 28 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.6 92.5 GSM436405 V. riparia (VR, PI588259) LD, 15h 28 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.5 91.9 GSM436402 V. riparia (VR, PI588259) LD, 15h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.5 91.9 GSM436392 V. riparia (VR, PI588259) LD, 15h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.5 91.9 GSM436403 V. riparia (VR, PI588259) LD, 15h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.4 91.3 GSM436367 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.4 91.3 GSM436424 V. riparia (VR, PI588259) SD, 13h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e-2 38 1619925_at CA813994 hypothetical protein LOC100263360 - 4e-1 At1g72360 ethylene-responsive element-binding protein, putative C.G. S.X.
0.02 1e-1 36 1616460_at CB970402 hypothetical protein LOC100243200 - 2e-3 At3g46300 unknown protein C.G. S.X.
0.03 1e-1 36 1608583_at BG273843 hypothetical protein LOC100259296 - 2e-8 At1g23800 ALDH2B7 C.G. S.X.
0.02 2e+0 32 1616535_at CB975659 hypothetical protein LOC100263924 - 1e-4 At3g18430 calcium-binding EF hand family protein C.G. S.X.
0.02 2e+0 32 1613925_at CF516555 - - 5e-3 At1g12520 ATCCS (COPPER CHAPERONE FOR SOD1) C.G. S.X.
0.02 2e+0 32 1609278_at BQ800064 hypothetical protein LOC100243664 - 6e+0 At5g53592 - C.G. S.X.
0.01 2e+0 32 1607810_at CB347619 hypothetical protein LOC100254410 - 2e-7 At3g19510 HAT3.1 C.G. S.X.
0.02 7e+0 30 1621511_at CF212324 hypothetical protein LOC100263809 - 2e+0 At2g17710 unknown protein C.G. S.X.
0.02 7e+0 30 1620153_at BQ797385 - - 7e-2 At4g22513 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.29 1e-40 167 Arabidopsis thaliana At5g42520 834259 ATBPC6 F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMOV - - - C.G. S.X.
0.16 4e-20 99 Glycine max Gma.2668.2.A1_at BE821049 - - 4e-6 At5g42520 ATBPC6 C.G. S.X.
0.03 3e+0 32 Hordeum vulgare Contig24540_at Contig24540 - - 3e-7 At5g27290 unknown protein C.G. S.X.
0.11 9e-13 75 Oryza sativa Os06g0130600 AK070616.1 - GAGA binding-like domain containing protein 1e-5 At5g42520 ATBPC6 C.G. S.X.
0.37 6e-81 301 Populus trichocarpa Ptp.1180.1.A1_at CV277694 hypothetical protein - 2e-30 At5g42520 ATBPC6 C.G. S.X.
0.03 4e-1 36 Triticum aestivum TaAffx.31856.1.S1_at CA606423 - - 3e-1 At3g46260 protein kinase-related C.G. S.X.
0.03 3e+0 32 Zea mays ZmAffx.600.1.A1_at AI715028 - - 3e+0 At5g16390 CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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