Gene omics information

Query gene ID	1614987_at
Gene name	hypothetical protein LOC100241685
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.73	90.8	1614987_at	CF609746	hypothetical protein LOC100241685	-	1e-15	At1g51340	MATE efflux family protein	S.X.	H.G.	Please select
0.56	79.4	1616183_at	CF405742	hypothetical protein LOC100257468	-	3e-1	At2g28190	CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2)	S.X.	H.G.	Please select
0.51	73.2	1612181_at	CF518786	hypothetical protein LOC100241990	-	7e-6	At4g14100	transferase, transferring glycosyl groups	S.X.	H.G.	Please select
0.46	66.5	1614416_at	CD013543	hypothetical protein LOC100244960	-	8e-6	At5g58900	myb family transcription factor	S.X.	H.G.	Please select
0.45	64.6	1615628_at	CB345697	hypothetical protein LOC100244782	-	5e-1	At4g10080	unknown protein	S.X.	H.G.	Please select
0.44	64.1	1614834_at	BQ794614	vacuolar pyrophosphatase	-	5e-156	At1g15690	AVP1	S.X.	H.G.	Please select
0.44	64.1	1621516_at	CB923323	hypothetical protein LOC100244761	-	2e-3	At2g14560	LURP1 (LATE UPREGULATED IN RESPONSE TO HYALOPERONOSPORA PARASITICA)	S.X.	H.G.	Please select
0.43	61.5	1613261_at	CF518683	-	-	7e-12	At5g38820	amino acid transporter family protein	S.X.	H.G.	Please select
0.41	58.7	1608878_s_at	CB923323	hypothetical protein LOC100244761	-	2e-3	At2g14560	LURP1 (LATE UPREGULATED IN RESPONSE TO HYALOPERONOSPORA PARASITICA)	S.X.	H.G.	Please select
0.41	58.7	1615676_a_at	CB346815	hypothetical protein LOC100246113	-	2e+0	At2g16595	-	S.X.	H.G.	Please select

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.1	99.1	GSM287882	Green soft berry A21 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
6.5	98.9	GSM287893	Pink soft berry C12 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
6.4	98.9	GSM287883	Green soft berry A23 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
6.3	98.8	GSM287881	Green soft berry B10 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
6.2	98.8	GSM287890	Pink soft berry C25 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
5.9	98.6	GSM287894	Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
5.9	98.6	GSM287891	Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
5.8	98.6	GSM287889	Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
5.3	98.2	GSM287902	Red soft berry C30 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
5.1	98.1	GSM287884	Green soft berry C7 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	2e-2	40	1608998_at	CA809208	hypothetical protein LOC100264883	-	5e-35	At5g16810	ATP binding / protein kinase	C.G.	S.X.	Please select
0.02	6e-2	38	1608068_at	BQ793085	hypothetical protein LOC100253134	-	3e-1	At5g51740	peptidase M48 family protein	C.G.	S.X.	Please select
0.02	3e-1	36	1620648_at	CD008794	hypothetical protein LOC100256959	-	1e+0	At4g27380	unknown protein	C.G.	S.X.	Please select
0.02	3e-1	36	1617930_at	BQ794757	hypothetical protein LOC100260270	-	4e-3	At2g28140	unknown protein	C.G.	S.X.	Please select
0.02	3e-1	36	1608053_at	CD008794	-	-	1e+0	At4g27380	unknown protein	C.G.	S.X.	Please select
0.02	3e-1	36	1607109_at	CF403653	hypothetical protein LOC100246586	-	5e-3	At5g48655	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.01	1e+0	34	1620483_at	CD712038	hypothetical protein LOC100255811	-	1e-14	At4g24520	ATR1 (ARABIDOPSIS P450 REDUCTASE 1)	C.G.	S.X.	Please select
0.01	1e+0	34	1614980_at	CF213518	hypothetical protein LOC100247199	-	8e-8	At4g24220	VEP1 (VEIN PATTERNING 1)	C.G.	S.X.	Please select
0.01	1e+0	34	1611112_at	CB971308	hypothetical protein LOC100260186	-	9e-34	At2g45790	PMM (PHOSPHOMANNOMUTASE)	C.G.	S.X.	Please select

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.22	1e-15	85	Arabidopsis thaliana	At1g51340	841557	MATE efflux family protein	F:drug transporter activity, antiporter activity;P:multidrug transport;C:endomembrane system, membrane;BOAPFM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.08	5e-9	63	Glycine max	Gma.17072.1.S1_at	BE822747	-	-	3e-5	At3g08040	FRD3 (FERRIC REDUCTASE DEFECTIVE 3)	C.G.	S.X.	Please select
0.02	1e-1	38	Hordeum vulgare	rbaal31f01_s_at	rbaal31f01	-	-	5e-1	At1g76590	zinc-binding family protein	C.G.	S.X.	Please select
0.23	2e-28	129	Oryza sativa	Os10g0206800	AK101612.1	-	Multi antimicrobial extrusion protein MatE familyprotein	7e-2	At1g67770	TEL2 (TERMINAL EAR1-LIKE 2)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.49	1e-111	404	Populus trichocarpa	PtpAffx.204872.1.S1_at	pmrna9628	hypothetical protein	-	2e-29	At1g51340	MATE efflux family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.06	1e-6	56	Triticum aestivum	Ta.25708.1.A1_at	CD373993	-	-	5e+0	At5g09260	VPS20.2 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 20.2)	C.G.	S.X.	Please select
0.01	1e+0	34	Zea mays	Zm.9264.1.A1_at	BM267689	-	-	2e+0	At5g13190	-	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage