Gene omics information

Query gene ID 1614966_at
Gene name similar to pumilio domain-containing protein PPD1
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6183.21614966_atBQ796346similar to pumilio domain-containing protein PPD1-1e-9At2g29190APUM2 (Arabidopsis Pumilio 2)S.X.H.G.
0.7591.31608653_atCB975644hypothetical protein LOC100263217-5e+0At4g15020DNA binding / protein dimerizationS.X.H.G.
0.6787.91622765_atCF405914--4e+0At3g59450calcium-binding EF hand family proteinS.X.H.G.
0.6183.21617655_atCB348593hypothetical protein LOC100262391-5e-10At3g16620ATTOC120S.X.H.G.
0.5375.21616867_atCF405655hypothetical protein LOC100254223-2e-17At3g01090AKIN10 (Arabidopsis SNF1 kinase homolog 10)S.X.H.G.
0.5375.21617406_s_atCF415339hypothetical protein LOC100266010-2e-8At3g07220transcriptional activator, putativeS.X.H.G.
0.4666.51619282_atCB971606hypothetical protein LOC100252267-5e-75At4g21710NRPB2S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
2.893.4GSM436382Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.793.0GSM436403V. riparia (VR, PI588259) LD, 15h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.591.9GSM436364Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.289.9GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45
2.289.9GSM436375Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
2.289.9GSM436398V. riparia (VR, PI588259) LD, 15h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.289.9GSM436418V. riparia (VR, PI588259) SD, 13h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.189.1GSM436363Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
2.189.1GSM436428V. riparia (VR, PI588259) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.189.1GSM436386Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-2381616245_atCF215646--5e-7At1g76160sks5 (SKU5 Similar 5)C.G.S.X.
0.033e-1341618409_atCF514784hypothetical protein LOC100257325-1e-1At4g34480catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compoundsC.G.S.X.
0.021e+0321622229_atCB002825--6e+0At5g16640pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.021e+0321618435_atCB002825--6e+0At5g16640pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.011e+0321618004_s_atCB339217AlaT1-2e-110At1g70580AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2)C.G.S.X.
0.031e+0321616759_atBQ799677hypothetical protein LOC100244675-9e-26At3g18430calcium-binding EF hand family proteinC.G.S.X.
0.031e+0321616446_atCB978171hypothetical protein LOC100265064-3e-67At2g29140APUM3 (Arabidopsis Pumilio 3)C.G.S.X.
0.021e+0321608205_atCA817318similar to Elongation factor Tu, chloroplastic-1e-76At4g20360ATRABE1B (ARABIDOPSIS RAB GTPASE HOMOLOG E1B)C.G.S.X.
0.011e+0321606795_atCB339217AlaT1-2e-110At1g70580AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-963Arabidopsis thalianaAt2g29190817468APUM2 (Arabidopsis Pumilio 2)F:RNA binding, binding;P:biological_process unknown;C:cellular_component unknown;FOMPB---C.G.S.X.
0.087e-961Glycine maxGmaAffx.71225.1.S1_atBG238413--2e-8At3g20250APUM5 (Arabidopsis Pumilio 5)C.G.S.X.
0.043e-238Hordeum vulgareContig24225_atContig24225--2e-12At3g10360APUM4 (Arabidopsis Pumilio 4)C.G.S.X.
0.052e-344Oryza sativaOs02g0819300CB671807-ARM repeat fold domain containing protein1e-7At2g29140APUM3 (Arabidopsis Pumilio 3)C.G.S.X.
0.221e-757Populus trichocarpaPtpAffx.63786.1.A1_atCV227640hypothetical protein-5e-3At3g20250APUM5 (Arabidopsis Pumilio 5)C.G.S.X.
0.073e-1375Triticum aestivumTa.9979.1.S1_atBJ241324--7e-6At4g25880APUM6 (Arabidopsis Pumilio 6)C.G.S.X.
0.073e-857Zea maysZm.4380.1.A1_atAY105814.1Hypothetical protein LOC100193145-5e-10At2g29200APUM1 (Arabidopsis Pumilio 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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