Gene omics information

Query gene ID	1614926_at
Gene name
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.50	72.7	1614926_at	CF369045	-	-	7e-8	At2g45630	oxidoreductase family protein	S.X.	H.G.	Please select
0.67	87.9	1612088_at	CF403659	hypothetical protein LOC100252369	-	6e-1	At4g08230	glycine-rich protein	S.X.	H.G.	Please select
0.46	66.5	1619736_at	CF210461	hypothetical protein LOC100241098	-	3e-30	At5g04460	protein binding / zinc ion binding	S.X.	H.G.	Please select
0.42	60.1	1617158_at	CB920605	hypothetical protein LOC100251931	-	4e-17	At5g19630	unknown protein	S.X.	H.G.	Please select
0.33	45.7	1616669_at	CF209174	hypothetical protein LOC100246496	-	2e-5	At4g00560	methionine adenosyltransferase regulatory beta subunit-related	S.X.	H.G.	Please select
0.29	37.7	1613468_at	CF405048	hypothetical protein LOC100250231	-	3e-55	At3g04730	IAA16	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.6	92.5	GSM147730	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	59
2.6	92.5	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
2.5	91.9	GSM147699	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	28
2.2	89.9	GSM147733	Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation	62
2.2	89.9	GSM147693	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	22
2.2	89.9	GSM147715	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	44
2.1	89.1	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.1	89.1	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
2.0	88.2	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.17	3e-35	147	1610027_at	CD798118	hypothetical protein LOC100253090	-	5e-2	At1g12550	oxidoreductase family protein	C.G.	S.X.	Please select
0.25	4e-31	133	1612393_s_at	CF207031.1	hypothetical protein LOC100253090	-	1e+0	At5g03090	unknown protein	C.G.	S.X.	Please select
0.06	8e-8	56	1613511_at	BQ796246	hypothetical protein LOC100251492	-	4e-1	At2g45630	oxidoreductase family protein	C.G.	S.X.	Please select
0.02	3e-1	34	1611583_at	CF405989	hypothetical protein LOC100250412	-	3e-5	At5g52020	AP2 domain-containing protein	C.G.	S.X.	Please select
0.03	1e+0	32	1620241_at	CB002686	-	-	1e+0	At2g28950	ATEXPA6 (ARABIDOPSIS THALIANA EXPANSIN A6)	C.G.	S.X.	Please select
0.01	1e+0	32	1617746_at	CF214456	hypothetical protein LOC100248500	-	0	At5g17920	ATMS1	C.G.	S.X.	Please select
0.02	1e+0	32	1615899_at	CD013375	hypothetical protein LOC100242540	-	9e-3	At4g14570	acylaminoacyl-peptidase-related	C.G.	S.X.	Please select
0.03	1e+0	32	1615572_at	CD714739	-	-	1e+0	At1g64040	TOPP3	C.G.	S.X.	Please select
0.02	1e+0	32	1615005_at	BM437456	-	-	2e+0	At5g08420	RNA binding	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.09	7e-8	57	Arabidopsis thaliana	At2g45630	819171	oxidoreductase family protein	F:NAD or NADH binding, binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, catalytic activity;P:metabolic process;C:unknown;BOMAFP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.13	4e-7	56	Glycine max	GmaAffx.69812.1.A1_at	BU544180	-	-	2e-5	At2g45630	oxidoreductase family protein	C.G.	S.X.	Please select
0.05	2e+0	32	Hordeum vulgare	HY10H19u_s_at	HY10H19u	-	-	5e+0	At5g54740	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please select
0.05	3e-8	59	Oryza sativa	Os04g0107200	AK106201.1	-	D-isomer specific 2-hydroxyacid dehydrogenase,catalytic region domain containing protein	1e-1	At5g66740	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.25	1e-22	107	Populus trichocarpa	PtpAffx.211486.1.S1_at	pmrna22513	hypothetical protein	-	1e-7	At2g45630	oxidoreductase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	6e-2	38	Triticum aestivum	Ta.28148.1.S1_at	CA622583	-	-	4e-4	At1g79870	oxidoreductase family protein	C.G.	S.X.	Please select
0.03	7e+0	30	Zea mays	ZmAffx.189.2.S1_a_at	AI668397	-	-	8e-1	At1g70510	KNAT2 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA 2)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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