CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1614917_at

Gene name hypothetical protein LOC100267340

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.8 1614917_at CF372079 hypothetical protein LOC100267340 - 4e+0 At5g60660 PIP2 S.X. H.G.
0.46 66.5 1608070_at CF214791 hypothetical protein LOC100245501 - 1e+0 At4g10880 unknown protein S.X. H.G.
0.46 66.5 1615115_at CD801173 hypothetical protein LOC100244778 - 1e-38 At5g05080 UBC22 (ubiquitin-conjugating enzyme 22) S.X. H.G.
0.44 64.1 1613351_at CB972999 hypothetical protein LOC100252023 - 2e-1 At5g12970 C2 domain-containing protein S.X. H.G.
0.44 64.1 1609302_at CB979609 similar to somatic embryogenesis receptor kinase - 7e-14 At1g34210 SERK2 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 2) S.X. H.G.
0.26 32.0 1607831_at BQ799075 hypothetical protein LOC100249242 - 8e-7 At3g03950 protein binding S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.5 95.7 GSM436389 V. riparia (VR, PI588259) LD, 15h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.5 95.7 GSM436379 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.4 95.5 GSM436388 V. riparia (VR, PI588259) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.3 95.2 GSM436371 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.2 94.9 GSM436370 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.2 94.9 GSM436381 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.1 94.6 GSM436412 V. riparia (VR, PI588259) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.1 94.6 GSM436355 Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.0 94.2 GSM436349 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.0 94.2 GSM436354 Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-1 34 1611224_at CD712799 - - 6e+0 At5g43750 unknown protein C.G. S.X.
0.03 3e-1 34 1607419_at CD712799 hypothetical protein LOC100263676 - 6e+0 At5g43750 unknown protein C.G. S.X.
0.05 1e+0 32 1622366_at CD797898 - - 2e-1 At2g22970 serine carboxypeptidase S10 family protein C.G. S.X.
0.02 1e+0 32 1618231_at AF141642.1 - - 8e-50 At2g37170 PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2) C.G. S.X.
0.03 1e+0 32 1617248_at CB979169 hypothetical protein LOC100265801 - 4e-19 At3g58560 endonuclease/exonuclease/phosphatase family protein C.G. S.X.
0.02 1e+0 32 1615808_s_at CF211264 aquaporin-like - 8e-53 At2g37170 PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2) C.G. S.X.
0.02 1e+0 32 1612945_s_at CF213687 hypothetical protein LOC100254639 - 1e-26 At1g54780 thylakoid lumen 18.3 kDa protein C.G. S.X.
0.02 5e+0 30 1622639_at CA810871 hypothetical protein LOC100254126 - 1e-4 At1g20440 COR47 (COLD-REGULATED 47) C.G. S.X.
0.02 5e+0 30 1621775_at CD720170 - - 2e+0 At4g35020 ARAC3 (ARABIDOPSIS RAC-LIKE 3) C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e+0 32 Arabidopsis thaliana At5g60660 836187 PIP2 F:water channel activity;P:transport;C:integral to membrane, membrane;BPMOFAV - - - C.G. S.X.
0.07 2e-6 54 Glycine max GmaAffx.84273.1.S1_at CA935637 - - 2e-9 At1g74690 IQD31 (IQ-domain 31) C.G. S.X.
0.03 9e+0 30 Hordeum vulgare HVSMEf0018I06r2_s_at HVSMEf0018I06r2 - - 2e+0 At3g27980 pectinesterase family protein C.G. S.X.
0.02 1e-1 38 Oryza sativa Os05g0535900 AK101555.1 - IQ calmodulin-binding region domain containingprotein 1e+0 At5g27690 heavy-metal-associated domain-containing protein C.G. S.X.
0.09 7e-15 81 Populus trichocarpa Ptp.604.1.S1_at CV252637 - - 1e-1 At2g32790 ubiquitin-conjugating enzyme, putative C.G. S.X.
0.03 5e+0 32 Triticum aestivum Ta.1785.1.A1_at BE445122 - - 2e-1 At2g40510 40S ribosomal protein S26 (RPS26A) C.G. S.X.
0.03 8e+0 30 Zea mays Zm.4624.1.A1_at AI737393 hypothetical protein LOC100278484 - 2e-1 At5g24879 unknown protein C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage