CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1614914_at

Gene name

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.97 99.9 1614914_at CB003306 - - 3e-1 At4g21330 DYT1 (DYSFUNCTIONAL TAPETUM 1) S.X. H.G.
0.50 72.7 1614850_at CF206621.1 - - 1e-10 At5g66290 unknown protein S.X. H.G.
0.48 68.8 1615765_x_at CF202835.1 - - 7e-4 At1g55680 WD-40 repeat family protein S.X. H.G.
0.43 61.5 1621680_x_at CF202023.1 - - 3e-1 At1g76220 unknown protein S.X. H.G.
0.38 53.6 1611512_at CF202451.1 hypothetical protein LOC100259812 - 2e-36 At1g21080 DNAJ heat shock N-terminal domain-containing protein S.X. H.G.
0.38 53.6 1614088_at CF208463 hypothetical protein LOC100258145 - 2e-21 At2g39170 unknown protein S.X. H.G.
0.38 53.6 1613529_at CF214571 hypothetical protein LOC100260925 - 4e+0 At5g37520 unknown protein S.X. H.G.
0.38 53.6 1622268_at CF372312 - - 9e-16 At4g11110 SPA2 (SPA1-RELATED 2) S.X. H.G.
0.36 50.7 1611084_at CA816784 - - 6e+0 At3g26690 ATNUDX13 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 13) S.X. H.G.
0.35 48.5 1611094_s_at CF516812 hypothetical protein LOC100253655 - 2e-11 At3g56460 oxidoreductase, zinc-binding dehydrogenase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.1 94.6 GSM147740 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 69
3.0 94.2 GSM147708 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 37
3.0 94.2 GSM436360 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM147723 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 52
2.9 93.8 GSM147729 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 58
2.7 93.0 GSM322367 genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1 GSE12842 Gene expression in grapevine in response to Bois noir infection
2.7 93.0 GSM147739 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 68
2.5 91.9 GSM147726 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 55
2.5 91.9 GSM147742 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 71
2.3 90.7 GSM322361 genotype: Chardonnay - disease type: Bois Noir infected - rep1 GSE12842 Gene expression in grapevine in response to Bois noir infection
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.91 0 1154 1618712_at CB003306 - - 3e-1 At4g21330 DYT1 (DYSFUNCTIONAL TAPETUM 1) C.G. S.X.
0.20 5e-31 133 1611923_at CA817577 - - 3e-1 At5g63740 zinc finger protein-related C.G. S.X.
0.28 3e-29 127 1613010_at CF403543 - - 4e+0 At4g21890 unknown protein C.G. S.X.
0.13 8e-27 119 1613712_at CF403703 hypothetical protein LOC100248230 - 3e-9 At2g37478 CPuORF52 (Conserved peptide upstream open reading frame 52) C.G. S.X.
0.11 7e-21 99 1611054_at CF516017 - - 4e+0 Atmg01290 - C.G. S.X.
0.22 7e-18 89 1616217_at CB003366 - - 5e+0 At4g13830 J20 (DNAJ-LIKE 20) C.G. S.X.
0.22 7e-18 89 1612410_at CB003366 - - 5e+0 At4g13830 J20 (DNAJ-LIKE 20) C.G. S.X.
0.11 4e-13 73 1613989_at CF414043 - - 7e-1 At4g11600 ATGPX6 (GLUTATHIONE PEROXIDASE 6) C.G. S.X.
0.04 2e-8 57 1617822_at CB976807 - - 1e-42 At3g46010 ADF1 (ACTIN DEPOLYMERIZING FACTOR 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-1 36 Arabidopsis thaliana At4g21330 827883 DYT1 (DYSFUNCTIONAL TAPETUM 1) Encodes a bHLH transcription factor strongly expressed in the tapetum from late anther stage 5 to early stage 6, and at a lower level in meiocytes. dyt1 mutant exhibits abnormal anther morphology beginning at anther stage 4. DYT1 acts downstream of SPL/NZZ and EMS1/EXS , and is required for normal expression of AMS, MS1 and other tapetum preferential genes. - - - C.G. S.X.
0.04 4e-1 36 Glycine max Gma.12644.1.A1_at CD393541 - - 3e+0 At4g18501 unknown protein C.G. S.X.
0.03 6e-1 34 Hordeum vulgare HS07P13u_s_at HS07P13u - - 5e-5 At3g16780 60S ribosomal protein L19 (RPL19B) C.G. S.X.
0.04 2e+0 34 Oryza sativa OsAffx.9093.1.S1_at - - - 0 C.G. S.X.
0.04 2e+0 34 Populus trichocarpa PtpAffx.40315.1.S1_at BU891653 - - 9e+0 At5g28310 oxidoreductase-related C.G. S.X.
0.04 1e+0 34 Triticum aestivum Ta.8753.1.A1_at BQ162326 - - 3e+0 At5g03050 unknown protein C.G. S.X.
0.02 2e+0 32 Zea mays Zm.9712.1.A1_at BM336467 - - 9e-2 At5g25810 tny (TINY) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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