CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1614893_at

Gene name

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.97 99.9 1614893_at CF568825 - - 1e-3 At1g78950 beta-amyrin synthase, putative S.X. H.G.
0.30 39.4 1619842_s_at BQ793715 hypothetical protein LOC100244132 - 1e+0 At5g08220 unknown protein S.X. H.G.
0.29 37.7 1615583_at CD800165 - - 2e-1 At1g71340 glycerophosphoryl diester phosphodiesterase family protein S.X. H.G.
0.27 34.0 1616925_at CB349059 hypothetical protein LOC100255820 - 7e-5 At4g00740 dehydration-responsive protein-related S.X. H.G.
0.22 25.6 1611353_at CK138189.1 - - 1e-9 At3g57780 - S.X. H.G.
0.20 22.4 1610470_at CF202637.1 - - 1e-7 At5g15150 ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3) S.X. H.G.
0.18 19.4 1608547_at CF371670 hypothetical protein LOC100253515 - 6e-1 At4g03292 nucleic acid binding S.X. H.G.
0.17 18.2 1614497_at CB001608 - - 3e+0 At3g52980 RNA recognition motif (RRM)-containing protein S.X. H.G.
0.17 18.2 1614217_at CK138191.1 hypothetical protein LOC100254189 - 4e+0 Atmg00650 - S.X. H.G.
0.17 18.2 1621260_at BQ797265 - - 3e-1 At4g30630 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.8 99.6 GSM436368 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
7.2 99.1 GSM436394 V. riparia (VR, PI588259) LD, 15h 7 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
6.0 98.7 GSM147721 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 50
5.8 98.6 GSM436346 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.4 97.3 GSM436391 V. riparia (VR, PI588259) LD, 15h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.3 97.2 GSM436389 V. riparia (VR, PI588259) LD, 15h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
4.0 96.7 GSM436411 V. riparia (VR, PI588259) SD, 13h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.5 95.7 GSM436393 V. riparia (VR, PI588259) LD, 15h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.3 95.2 GSM436348 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.3 95.2 GSM436376 Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 3e-10 63 1618177_at CF511456 hypothetical protein LOC100243389 - 9e-40 At2g07050 CAS1 (cycloartenol synthase 1) C.G. S.X.
0.03 1e+0 32 1622706_at CB002948 - - 1e+0 At3g62030 peptidyl-prolyl cis-trans isomerase, chloroplast / cyclophilin / rotamase / cyclosporin A-binding protein (ROC4) C.G. S.X.
0.04 1e+0 32 1620131_at CF415368 - - 2e-10 At3g01940 unknown protein C.G. S.X.
0.03 1e+0 32 1618896_at CB002948 - - 1e+0 At3g62030 peptidyl-prolyl cis-trans isomerase, chloroplast / cyclophilin / rotamase / cyclosporin A-binding protein (ROC4) C.G. S.X.
0.03 5e+0 30 1620100_at CF413860 hypothetical protein LOC100241687 - 7e-2 At1g60815 RALFL7 (RALF-LIKE 7) C.G. S.X.
0.03 5e+0 30 1620047_at CF373088 hypothetical protein LOC100260631 - 1e+0 At3g60770 40S ribosomal protein S13 (RPS13A) C.G. S.X.
0.02 5e+0 30 1619710_at BM436446 - - 2e-9 At1g58170 disease resistance-responsive protein-related / dirigent protein-related C.G. S.X.
0.03 5e+0 30 1619627_at CB976213 hypothetical protein LOC100257983 - 4e-6 At5g04560 DME (DEMETER) C.G. S.X.
0.02 5e+0 30 1618663_s_at BM436446 hypothetical protein LOC100263839 - 2e-9 At1g58170 disease resistance-responsive protein-related / dirigent protein-related C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.17 1e-3 44 Arabidopsis thaliana At1g78950 844234 beta-amyrin synthase, putative F:beta-amyrin synthase activity;P:unknown;C:unknown;BPOFMA - - - C.G. S.X.
0.23 5e-37 155 Glycine max Gma.16877.1.S1_at AY095999.1 beta-amyrin synthase - 7e-30 At1g78955 CAMS1 (Camelliol C synthase 1) C.G. S.X.
0.05 8e-3 40 Hordeum vulgare Contig11705_at Contig11705 - - 3e-29 At2g07050 CAS1 (cycloartenol synthase 1) C.G. S.X.
0.05 1e-1 38 Oryza sativa Os02g0139700 AK121211.1 - Cycloartenol synthase (EC 5.4.99.8) 2e-24 At2g07050 CAS1 (cycloartenol synthase 1) C.G. S.X.
0.19 3e-23 109 Populus trichocarpa PtpAffx.225828.1.S1_s_at pmrna45440 hypothetical protein - 6e-24 At1g78955 CAMS1 (Camelliol C synthase 1) C.G. S.X.
0.09 1e+0 34 Triticum aestivum TaAffx.119776.1.S1_at BJ258989 - - 2e-11 At3g45130 LAS1 C.G. S.X.
0.06 7e+0 30 Zea mays Zm.5697.1.S1_a_at BU093479 - - 2e-3 At2g07050 CAS1 (cycloartenol synthase 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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