CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1614806_s_at

Gene name hypothetical protein LOC100264507

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 81.9 1614806_s_at CB343751 hypothetical protein LOC100264507 - 2e-4 At2g25000 WRKY60 S.X. H.G.
0.70 88.6 1610064_at CB341653 similar to DNA-binding protein - 3e-19 At2g38470 WRKY33 S.X. H.G.
0.67 87.9 1616557_s_at CF204113.1 hypothetical protein LOC100252599 - 3e-2 At1g01490 heavy-metal-associated domain-containing protein S.X. H.G.
0.63 84.3 1614461_s_at CF204470.1 hypothetical protein LOC100252599 /// hypothetical LOC100254334 - 3e-1 At5g24770 VSP2 (VEGETATIVE STORAGE PROTEIN 2) S.X. H.G.
0.57 79.8 1609265_at CD800725 hypothetical protein LOC100255460 - 5e-2 At3g60530 zinc finger (GATA type) family protein S.X. H.G.
0.57 79.8 1622399_at CF206628.1 similar to DNA-binding protein - 2e-27 At4g31550 WRKY11 S.X. H.G.
0.56 79.4 1611285_s_at CA809190 similar to DNA-binding protein - 3e-22 At4g31550 WRKY11 S.X. H.G.
0.53 75.2 1609171_at CA813062 hypothetical protein LOC100251782 - 2e-2 At1g07530 SCL14 (SCARECROW-LIKE 14) S.X. H.G.
0.36 50.7 1611650_at CA808599 hypothetical protein LOC100244122 - 3e-26 At2g23320 WRKY15 S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
15.5 99.9 GSM436414 V. riparia (VR, PI588259) SD, 13h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
10.7 99.7 GSM436351 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
10.3 99.6 GSM436413 V. riparia (VR, PI588259) SD, 13h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
9.0 99.5 GSM436367 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
6.4 98.9 GSM147716 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 45
6.1 98.7 GSM147735 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 64
5.7 98.5 GSM436391 V. riparia (VR, PI588259) LD, 15h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
5.2 98.2 GSM436370 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.6 97.6 GSM436419 V. riparia (VR, PI588259) SD, 13h 14 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
4.4 97.3 GSM436349 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e-1 36 1622862_at CB004075 - - 1e-38 Atcg00440 - C.G. S.X.
0.00 2e-1 36 1620265_at BQ793093 - - 0 Atcg00480 - C.G. S.X.
0.02 2e-1 36 1612005_s_at CB004075 - - 1e-38 Atcg00440 - C.G. S.X.
0.00 2e-1 36 1610039_s_at CA817529 similar to NADH-plastoquinone oxidoreductase subunit K - 0 Atcg00480 - C.G. S.X.
0.02 7e-1 34 1619880_at CD714848 - - 1e-3 At1g64385 unknown protein C.G. S.X.
0.02 7e-1 34 1616108_at CD714848 hypothetical protein LOC100254757 - 1e-3 At1g64385 unknown protein C.G. S.X.
0.02 7e-1 34 1614309_at CF212710 hypothetical protein LOC100252440 - 3e-5 At4g31520 SDA1 family protein C.G. S.X.
0.01 3e+0 32 1619407_s_at CA809049 hypothetical protein LOC100256548 - 3e-12 At1g76690 OPR2 C.G. S.X.
0.02 3e+0 32 1614131_at CF415600 hypothetical protein LOC100247551 - 6e-2 At2g36760 UGT73C2 (UDP-glucosyl transferase 73C2) C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.19 2e-4 48 Arabidopsis thaliana At2g25000 817039 WRKY60 Pathogen-induced transcription factor. Forms protein complexes with itself and with WRKY40. Coexpression with WRKY18 or WRKY40 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two. - - - C.G. S.X.
0.14 3e-31 137 Glycine max Gma.3730.2.S1_a_at BI320846 transcription factor - 9e-15 At1g80840 WRKY40 C.G. S.X.
0.07 1e-15 83 Hordeum vulgare Contig4386_at Contig4386 - - 5e-2 At5g50470 NF-YC7 (NUCLEAR FACTOR Y, SUBUNIT C7) C.G. S.X.
0.08 2e-14 81 Oryza sativa Os.12032.1.S1_at - - - 0 C.G. S.X.
0.19 2e-20 101 Populus trichocarpa PtpAffx.5224.2.A1_at CV258799 hypothetical protein - 1e-10 At2g25000 WRKY60 C.G. S.X.
0.08 3e-15 83 Triticum aestivum Ta.4678.2.S1_at CK163938 WRKY8 transcription factor - 1e-2 At5g07600 oleosin / glycine-rich protein C.G. S.X.
0.04 4e-3 42 Zea mays Zm.8326.1.A1_at BM073693 - - 1e+0 At5g07100 WRKY26 C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage