Gene omics information

Query gene ID	1614751_at
Gene name	hypothetical protein LOC100241010
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	87.9	1614751_at	CA809521	hypothetical protein LOC100241010	-	5e-37	At4g22380	ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	S.X.	H.G.	Please select
0.50	72.7	1615911_at	CF512086	hypothetical protein LOC100243469	-	2e-66	At3g57290	EIF3E (EUKARYOTIC TRANSLATION INITIATION FACTOR 3E)	S.X.	H.G.	Please select
0.47	67.7	1614840_at	CF415070	hypothetical protein LOC100248036	-	2e-56	At1g10840	TIF3H1	S.X.	H.G.	Please select
0.44	64.1	1614425_at	CB339536	hypothetical protein LOC100251424	-	8e-7	At3g02200	proteasome family protein	S.X.	H.G.	Please select
0.43	61.5	1621991_at	CB978460	hypothetical protein LOC100243393	-	1e-1	At2g41060	RNA recognition motif (RRM)-containing protein	S.X.	H.G.	Please select
0.42	60.1	1612039_at	BQ799884	hypothetical protein LOC100266651	-	1e-18	At2g03870	small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.7	93.0	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436396	V. riparia (VR, PI588259) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436388	V. riparia (VR, PI588259) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436420	V. riparia (VR, PI588259) SD, 13h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436368	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM436418	V. riparia (VR, PI588259) SD, 13h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM436416	V. riparia (VR, PI588259) SD, 13h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM436419	V. riparia (VR, PI588259) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM436390	V. riparia (VR, PI588259) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.42	3e-79	293	1614057_s_at	CF511817	hypothetical protein LOC100252442	-	5e-47	At4g22380	ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	C.G.	S.X.	Please select
0.02	4e-1	34	1621186_at	CB979347	-	-	2e-3	At1g49620	ICK5	C.G.	S.X.	Please select
0.02	2e+0	32	1622386_at	BQ794629	hypothetical protein LOC100264172	-	9e-3	At5g44210	ERF9 (ERF DOMAIN PROTEIN 9)	C.G.	S.X.	Please select
0.02	2e+0	32	1620807_at	CF514955	hypothetical protein LOC100240901	-	6e-10	At3g23280	zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein	C.G.	S.X.	Please select
0.01	2e+0	32	1615217_at	CB978480	hypothetical protein LOC100267152	-	3e-6	At3g16910	AAE7 (ACYL-ACTIVATING ENZYME 7)	C.G.	S.X.	Please select
0.02	2e+0	32	1611525_at	CF372366	UPF0497 membrane protein 6	-	1e+0	At3g48890	ATMP2	C.G.	S.X.	Please select
0.02	2e+0	32	1607740_at	CF512482	-	-	1e+0	At3g48890	ATMP2	C.G.	S.X.	Please select
0.02	6e+0	30	1622606_at	CB910226	GDP-D-mannose pyrophosphorylase	-	4e-157	At2g39770	CYT1 (CYTOKINESIS DEFECTIVE 1)	C.G.	S.X.	Please select
0.01	6e+0	30	1622148_at	CB003815	hypothetical protein LOC100248028	-	4e-175	At5g36790	phosphoglycolate phosphatase, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.44	5e-37	155	Arabidopsis thaliana	At4g22380	828333	ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	F:RNA binding;P:ribosome biogenesis;C:nucleolus;MOAFPB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.38	1e-57	224	Glycine max	Gma.17953.1.A1_at	AI496072	-	-	6e-30	At5g20160	ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	C.G.	S.X.	Please select
0.21	6e-32	137	Hordeum vulgare	Contig1368_at	Contig1368	-	-	5e-20	At1g67430	60S ribosomal protein L17 (RPL17B)	C.G.	S.X.	Please select
Os08g0129200	0.32	3e-21	Oryza sativa	Os03g0241200	-	-	-	0			C.G.	S.X.	Please select
0.41	1e-60	234	Populus trichocarpa	Ptp.6768.1.S1_at	CV268525	hypothetical protein	-	1e-56	At5g20160	ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.23	3e-26	119	Triticum aestivum	Ta.12661.1.S1_at	BJ220764	-	-	2e-9	At5g20160	ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	C.G.	S.X.	Please select
0.28	5e-23	107	Zea mays	Zm.2052.1.S1_at	BM078951	NHP2-like protein 1	-	2e-9	At4g22380	ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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