CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1614718_at

Gene name hypothetical protein LOC100264520

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.8 1614718_at CB347599 hypothetical protein LOC100264520 - 7e-11 At5g20700 senescence-associated protein-related S.X. H.G.
0.40 57.7 1610618_at CB347516 hypothetical protein LOC100264520 - 3e-1 At5g62480 ATGSTU9 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 9) S.X. H.G.
0.02 3.2 1611686_at CB969423 hypothetical protein LOC100255085 - 7e+0 At5g26080 proline-rich family protein S.X. H.G.
0.01 2.1 1606658_at CB981496 hypothetical protein LOC100242421 /// hypothetical protein LOC100249803 - 5e-26 At2g22870 EMB2001 (embryo defective 2001) S.X. H.G.
0.01 2.1 1607788_at CA815954 hypothetical protein LOC100254226 - 7e-19 At5g11270 OCP3 (OVEREXPRESSOR OF CATIONIC PEROXIDASE 3) S.X. H.G.
0.01 2.1 1615203_at CA818658 hypothetical protein LOC100258284 - 7e-2 At5g57060 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.6 98.4 GSM287873 Green hard berry B9 from plant 2 cluster proximal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
3.9 96.6 GSM436410 V. riparia (VR, PI588259) SD, 13h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.4 95.5 GSM287875 Green hard berry C17 from plant 2 cluster proximal position, biological rep 2 GSE11406 Expression data in individual grape berries during ripening initation
3.4 95.5 GSM322365 genotype: Chardonnay - disease type: Healthy - rep2 GSE12842 Gene expression in grapevine in response to Bois noir infection
3.3 95.2 GSM287879 Green hard berry C19 from plant 2 cluster distal position, biological rep 2 GSE11406 Expression data in individual grape berries during ripening initation
3.3 95.2 GSM299461 C_ni_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.9 93.8 GSM322364 genotype: Chardonnay - disease type: Healthy - rep1 GSE12842 Gene expression in grapevine in response to Bois noir infection
2.9 93.8 GSM436409 V. riparia (VR, PI588259) SD, 13h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM147741 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 70
2.8 93.4 GSM287886 Green soft berry C22 from plant 2 cluster proximal position, biological rep 2 GSE11406 Expression data in individual grape berries during ripening initation
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 1e-12 71 1610618_at CB347516 hypothetical protein LOC100264520 - 3e-1 At5g62480 ATGSTU9 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 9) C.G. S.X.
0.03 1e-3 42 1609757_s_at CF517381 hypothetical protein LOC100244902 - 1e-8 At5g20700 senescence-associated protein-related C.G. S.X.
0.04 2e-2 38 1619740_at CF214472 hypothetical protein LOC100260241 - 2e-1 At2g27535 ribosomal protein L10A family protein C.G. S.X.
0.02 3e-1 34 1621729_at CB347151 hypothetical protein LOC100257717 - 2e-56 At4g31700 RPS6 (RIBOSOMAL PROTEIN S6) C.G. S.X.
0.03 1e+0 32 1620635_at CA818588 - - 6e-2 At1g73030 VPS46.2 C.G. S.X.
0.02 1e+0 32 1611831_at CA812347 - - 5e-4 At5g27620 CYCH C.G. S.X.
0.01 1e+0 32 1609007_at CB003639 hypothetical protein LOC100240979 - 5e-27 At4g30210 ATR2 (ARABIDOPSIS P450 REDUCTASE 2) C.G. S.X.
0.03 1e+0 32 1608733_at CD802217 - - 4e+0 At5g40980 unknown protein C.G. S.X.
0.01 5e+0 30 1620621_at CF519062 similar to nam-like protein - 4e-33 At1g01720 ATAF1 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 7e-11 67 Arabidopsis thaliana At5g20700 832193 senescence-associated protein-related F:unknown;P:biological_process unknown;C:unknown;P - - - C.G. S.X.
0.14 5e-31 135 Glycine max Gma.5309.1.S1_at BM092263 - - 2e-3 At5g20700 senescence-associated protein-related C.G. S.X.
0.05 5e-1 34 Hordeum vulgare Contig4066_at Contig4066 - - 1e-4 At4g17670 senescence-associated protein-related C.G. S.X.
0.10 3e-2 40 Oryza sativa OsAffx.19357.1.S1_at - - - 0 C.G. S.X.
0.23 7e-21 101 Populus trichocarpa PtpAffx.22243.1.S1_at CV277653 - - 1e-1 At5g47060 senescence-associated protein-related C.G. S.X.
0.06 4e-3 42 Triticum aestivum Ta.22389.1.S1_at CA742022 - - 2e-1 At1g78480 prenyltransferase/squalene oxidase repeat-containing protein C.G. S.X.
0.03 7e+0 30 Zea mays ZmAffx.44.1.A1_at AI664910 - - 8e-1 At4g32060 calcium-binding EF hand family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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