Gene omics information

Query gene ID	1614685_at
Gene name	hypothetical protein LOC100264962
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	87.9	1614685_at	CF515859	hypothetical protein LOC100264962	-	2e-18	At5g02280	synbindin, putative	S.X.	H.G.	Please select
0.67	87.9	1614645_at	CB917806	similar to putative anti-virus transcriptional factor	-	1e-4	At5g62910	protein binding / zinc ion binding	S.X.	H.G.	Please select
0.57	79.8	1615134_at	CF213762	hypothetical protein LOC100259710	-	7e-9	At5g51040	unknown protein	S.X.	H.G.	Please select
0.40	57.7	1613988_at	BM436608	similar to RPL18AA (60S RIBOSOMAL PROTEIN L18A-1); structural constituent of ribosome	-	8e-2	At1g53560	unknown protein	S.X.	H.G.	Please select
0.33	45.7	1616236_at	CB007372	hypothetical protein LOC100260831	-	2e-22	At1g43900	protein phosphatase 2C, putative / PP2C, putative	S.X.	H.G.	Please select
0.26	32.0	1611475_at	CB976806	hypothetical protein LOC100267480	-	6e-26	At1g02305	cathepsin B-like cysteine protease, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.5	97.5	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
4.4	97.3	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
4.2	97.1	GSM287889	Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
4.1	96.9	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.6	96.0	GSM287875	Green hard berry C17 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.3	95.2	GSM287883	Green soft berry A23 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.3	95.2	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.3	95.2	GSM287893	Pink soft berry C12 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.2	94.9	GSM287882	Green soft berry A21 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.2	94.9	GSM287891	Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	2e-2	38	1607864_at	CD801531	hypothetical protein LOC100245428	-	4e-1	At1g10652	unknown protein	C.G.	S.X.	Please select
0.03	4e-1	34	1619030_at	CD712926	-	-	5e-1	At5g50650	WD-40 repeat family protein / St12p protein, putative	C.G.	S.X.	Please select
0.03	4e-1	34	1615218_at	CD712926	hypothetical protein LOC100266615	-	5e-1	At5g50650	WD-40 repeat family protein / St12p protein, putative	C.G.	S.X.	Please select
0.01	2e+0	32	1620577_at	BQ800051	hypothetical protein LOC100262487	-	2e-10	At5g42950	GYF domain-containing protein	C.G.	S.X.	Please select
0.03	2e+0	32	1617069_at	CB007493	-	-	4e+0	At4g07868	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	32	1616907_at	CF516672	-	-	3e+0	At4g19100	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	32	1613209_at	CB007493	-	-	4e+0	At4g07868	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	32	1612105_at	CF415846	hypothetical protein LOC100263066	-	4e-19	At2g26640	KCS11 (3-KETOACYL-COA SYNTHASE 11)	C.G.	S.X.	Please select
0.02	6e+0	30	1622609_at	CF207176	-	-	1e+0	At5g51360	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.23	2e-18	93	Arabidopsis thaliana	At5g02280	831680	synbindin, putative	F:molecular_function unknown;P:transport, ER to Golgi vesicle-mediated transport;C:cis-Golgi network;MFOP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.54	3e-42	173	Glycine max	GmaAffx.91258.1.S1_s_at	CF806983	-	-	1e-15	At5g02280	synbindin, putative	C.G.	S.X.	Please select
0.04	4e-5	48	Hordeum vulgare	Contig17228_at	Contig17228	-	-	1e+0	At3g44070	beta-galactosidase	C.G.	S.X.	Please select
0.10	7e-10	65	Oryza sativa	Os07g0454700	AK058258.1	-	Trafficking protein particle complex subunit 4(Synbindin) (TRS23 homolog)	3e-4	At5g02280	synbindin, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.42	5e-87	321	Populus trichocarpa	Ptp.7585.2.S1_s_at	CK092437	hypothetical protein	-	5e-44	At5g02280	synbindin, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	4e-4	46	Triticum aestivum	Ta.8352.1.S1_at	BQ161778	-	-	2e+0	At5g02280	synbindin, putative	C.G.	S.X.	Please select
0.04	2e-4	46	Zea mays	Zm.6356.1.A1_at	BM332624	trafficking protein particle complex subunit 4	-	1e-5	At5g02280	synbindin, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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