Gene omics information

Query gene ID	1614669_at
Gene name
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.86	95.1	1614669_at	CF513785	-	-	1e+0	At2g15390	FUT4	S.X.	H.G.	Please select
0.59	80.6	1621199_at	CF204390.1	-	-	1e+1	At5g11440	CID5	S.X.	H.G.	Please select
0.39	54.9	1619053_s_at	CB035779	hypothetical protein LOC100256257	-	2e+0	At5g57290	60S acidic ribosomal protein P3 (RPP3B)	S.X.	H.G.	Please select
0.38	53.6	1607451_at	CB345121	hypothetical protein LOC100260491	-	1e+0	At4g37685	unknown protein	S.X.	H.G.	Please select
0.36	50.7	1610826_at	CF214236	hypothetical protein LOC100265882	-	1e-6	At1g05205	unknown protein	S.X.	H.G.	Please select
0.29	37.7	1619402_at	CF517188	hypothetical protein LOC100252501	-	6e-2	At3g13710	PRA1.F4 (PRENYLATED RAB ACCEPTOR 1.F4)	S.X.	H.G.	Please select
0.29	37.7	1620757_at	CF372931	hypothetical protein LOC100260825	-	4e-3	At1g51600	TIFY2A	S.X.	H.G.	Please select
0.26	32.0	1619939_at	CB971326	-	-	2e+1	At5g43430	ETFBETA	S.X.	H.G.	Please select
0.25	30.5	1617652_s_at	CF517834	hypothetical protein LOC100249964	-	3e-2	At3g63310	glutamate binding	S.X.	H.G.	Please select
0.23	27.5	1616425_at	CF208709	hypothetical protein LOC100260616	-	5e-7	At2g32730	26S proteasome regulatory subunit, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.5	98.4	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
5.4	98.3	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
5.2	98.2	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
5.1	98.1	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
4.7	97.7	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
4.5	97.5	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
4.4	97.3	GSM147730	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	59
4.4	97.3	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
4.2	97.1	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
4.1	96.9	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	3e-4	44	1613924_at	CB342218	-	-	4e-1	At1g76260	transducin family protein / WD-40 repeat family protein	C.G.	S.X.	Please select
0.03	3e-1	34	1616278_a_at	CB036183	hypothetical protein LOC100257613	-	5e+0	At3g12510	unknown protein	C.G.	S.X.	Please select
0.02	3e-1	34	1609116_at	CF372509	hypothetical protein LOC100257613	-	3e+0	At1g54460	-	C.G.	S.X.	Please select
0.03	1e+0	32	1622649_at	CF513425	-	-	6e+0	At5g45820	CIPK20 (CBL-INTERACTING PROTEIN KINASE 20)	C.G.	S.X.	Please select
0.02	1e+0	32	1617655_at	CB348593	hypothetical protein LOC100262391	-	5e-10	At3g16620	ATTOC120	C.G.	S.X.	Please select
0.03	1e+0	32	1613393_at	CF514050	hypothetical protein LOC100242912	-	1e-34	At3g27000	ARP2 (ACTIN RELATED PROTEIN 2)	C.G.	S.X.	Please select
0.04	1e+0	32	1611736_at	CB972366	-	-	8e-2	At5g27020	unknown protein	C.G.	S.X.	Please select
0.04	1e+0	32	1610339_at	CD006681	-	-	6e+0	At5g63225	-	C.G.	S.X.	Please select
0.04	1e+0	32	1609572_at	CF516529	-	-	1e+0	At3g48237	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e+0	34	Arabidopsis thaliana	At2g15390	816031	FUT4	Predicted fucosyltransferase, based on similarity to FUT1, but not functionally redundant with FUT1.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	6e+0	32	Glycine max	GmaAffx.84844.1.S1_at	AW458869	-	-	2e+0	At1g19710	glycosyl transferase family 1 protein	C.G.	S.X.	Please select
0.04	8e+0	30	Hordeum vulgare	HV_CEb0015P21f_s_at	HV_CEb0015P21f	-	-	5e-2	At2g13560	malate oxidoreductase, putative	C.G.	S.X.	Please select
0.05	2e+0	34	Oryza sativa	Os07g0216900	XM_354135.1	-	-	6e+0	At3g24570	peroxisomal membrane 22 kDa family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	6e+0	32	Populus trichocarpa	PtpAffx.224029.1.S1_x_at	pmrna42263	hypothetical protein	-	1e+0	At5g41520	40S ribosomal protein S10 (RPS10B)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	1e+0	34	Triticum aestivum	TaAffx.107958.1.S1_at	CA692856	-	-	5e-2	At4g15790	unknown protein	C.G.	S.X.	Please select
0.03	7e+0	30	Zea mays	Zm.4210.1.S1_at	BM078256	bundle sheath defective protein 2	-	4e-1	At3g13430	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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