CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1614664_at

Gene name

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.8 1614664_at CB002179 - - 1e-1 At5g63620 oxidoreductase, zinc-binding dehydrogenase family protein S.X. H.G.
0.04 5.2 1616290_at CK136938.1 - - 7e-5 At2g39770 CYT1 (CYTOKINESIS DEFECTIVE 1) S.X. H.G.
0.04 5.2 1613521_at CF514518 metallothionein - 5e-19 At3g09390 MT2A (METALLOTHIONEIN 2A) S.X. H.G.
0.03 4.2 1617989_at CF511562 hypothetical protein LOC100258149 - 4e-1 At5g19340 unknown protein S.X. H.G.
0.00 0.5 1612360_at CB970071 hypothetical protein LOC100244110 - 2e-152 At3g28710 H+-transporting two-sector ATPase, putative S.X. H.G.
0.00 0.5 1615516_at CF511735 hypothetical protein LOC100255660 - 5e+0 At4g11760 LCR17 (Low-molecular-weight cysteine-rich 17) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
13.6 99.8 GSM147727 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 56
12.6 99.8 GSM436367 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
7.9 99.3 GSM147685 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 14
6.0 98.7 GSM436413 V. riparia (VR, PI588259) SD, 13h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
5.6 98.4 GSM436348 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
4.8 97.8 GSM436368 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
4.8 97.8 GSM436346 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.1 96.9 GSM299461 C_ni_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.7 96.2 GSM147712 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 41
3.7 96.2 GSM147714 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 43
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.93 9e-77 284 1610887_at CB002179 hypothetical protein LOC100260980 - 1e-1 At5g63620 oxidoreductase, zinc-binding dehydrogenase family protein C.G. S.X.
0.03 5e-1 32 1621269_at CB003298 - - 1e+0 At1g43666 lipid transfer protein-related C.G. S.X.
0.02 5e-1 32 1614671_at CF210781 hypothetical protein LOC100241316 - 4e-8 At3g51500 unknown protein C.G. S.X.
0.03 5e-1 32 1608662_at CB003298 - - 1e+0 At1g43666 lipid transfer protein-related C.G. S.X.
0.02 2e+0 30 1622747_at CF210672 hypothetical protein LOC100254207 - 3e-18 At5g52440 HCF106 C.G. S.X.
0.03 2e+0 30 1622549_at CA814078 hypothetical protein LOC100256090 - 1e-16 At5g16960 NADP-dependent oxidoreductase, putative C.G. S.X.
0.04 2e+0 30 1621809_at CF513318 hypothetical protein LOC100266921 - 5e+0 At5g48220 indole-3-glycerol phosphate synthase, putative C.G. S.X.
0.03 2e+0 30 1618620_at CF403144 hypothetical protein LOC100262172 - 5e-10 At3g55960 NLI interacting factor (NIF) family protein C.G. S.X.
0.03 2e+0 30 1617467_at BQ793846 hypothetical protein LOC100265852 - 6e-22 At5g28830 calcium-binding EF hand family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 1e-1 36 Arabidopsis thaliana At5g63620 836482 oxidoreductase, zinc-binding dehydrogenase family protein F:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:oxidation reduction, metabolic process;C:unknown;BOPFMAV - - - C.G. S.X.
0.07 2e-7 56 Glycine max GmaAffx.87563.1.S1_at BG881336 - - 1e-41 At5g63620 oxidoreductase, zinc-binding dehydrogenase family protein C.G. S.X.
0.05 1e+1 28 Hordeum vulgare rbags15p13_s_at rbags15p13 - - 2e+0 At5g58140 PHOT2 (PHOTOTROPIN 2) C.G. S.X.
0.06 4e+0 32 Oryza sativa Os03g0289300 9631.m01771 - Phosphoinositide-specific phospholipase C (EC3.1.4.11) 5e-11 At3g08510 ATPLC2 (PHOSPHOLIPASE C 2) C.G. S.X.
0.08 6e-1 34 Populus trichocarpa PtpAffx.208632.1.S1_at pmrna17132 hypothetical protein - 1e-6 At1g24405 unknown protein C.G. S.X.
0.06 2e+0 32 Triticum aestivum Ta.27997.1.A1_at CA605540 - - 1e+1 At5g20180 ribosomal protein L36 family protein C.G. S.X.
0.06 2e-1 34 Zea mays Zm.4952.1.A1_at AI586613 - - 2e-1 At5g59000 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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