CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1614655_at

Gene name hypothetical protein LOC100267459

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 89.5 1614655_at CB969062 hypothetical protein LOC100267459 - 2e-61 At5g45930 CHLI2 (MAGNESIUM CHELATASE I2) S.X. H.G.
0.86 95.1 1609228_at CF403419 hypothetical protein LOC100247047 - 9e-5 At2g21385 unknown protein S.X. H.G.
0.82 93.9 1617061_s_at CD003896 hypothetical protein LOC100243475 - 2e-15 At5g55220 trigger factor type chaperone family protein S.X. H.G.
0.71 89.5 1610716_at CF211147 hypothetical protein LOC100265925 - 5e-16 At3g15190 chloroplast 30S ribosomal protein S20, putative S.X. H.G.
0.71 89.5 1615609_at CB971917 hypothetical protein LOC100268043 - 1e-11 At3g25920 RPL15 S.X. H.G.
0.71 89.5 1606797_at CD714405 similar to 50S ribosomal protein L17, chloroplastic - 3e-8 At3g54210 ribosomal protein L17 family protein S.X. H.G.
0.67 87.9 1620684_at CA811105 hypothetical protein LOC100244408 - 5e-10 At1g64510 ribosomal protein S6 family protein S.X. H.G.
0.53 75.2 1622495_at BM436258 hypothetical protein LOC100248841 - 4e-26 At1g74970 RPS9 (RIBOSOMAL PROTEIN S9) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.3 98.8 GSM147726 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 55
5.9 98.6 GSM147714 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 43
5.1 98.1 GSM147712 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 41
4.4 97.3 GSM147732 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 61
4.4 97.3 GSM147720 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 49
4.1 96.9 GSM147728 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 57
4.1 96.9 GSM147727 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 56
4.1 96.9 GSM147738 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 67
4.0 96.7 GSM147742 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 71
4.0 96.7 GSM147730 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 59
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e-12 71 1607056_at CB035965 hypothetical protein LOC100267459 - 2e-24 At5g45930 CHLI2 (MAGNESIUM CHELATASE I2) C.G. S.X.
0.03 9e-3 40 1611596_at CD715230 - - 4e-62 At2g25830 YebC-related C.G. S.X.
0.03 9e-3 40 1607821_at CD715230 hypothetical protein LOC100245721 - 4e-62 At2g25830 YebC-related C.G. S.X.
0.02 5e-1 34 1615912_at CA813921 chalcone isomerase - 2e+0 At5g05270 chalcone-flavanone isomerase family protein C.G. S.X.
0.02 5e-1 34 1614332_s_at CA814568 hypothetical protein LOC100265533 - 4e-4 At2g28710 zinc finger (C2H2 type) family protein C.G. S.X.
0.02 5e-1 34 1613003_at CA817428 - - 7e+0 At5g15440 EDL1 (EID1-like 1) C.G. S.X.
0.02 2e+0 32 1622552_at CB008694 - - 9e-15 At2g46910 plastid-lipid associated protein PAP / fibrillin family protein C.G. S.X.
0.01 2e+0 32 1621614_at CB837613 hypothetical LOC100249559 - 0 Atcg01000 - C.G. S.X.
0.01 2e+0 32 1619564_s_at CB837613 - - 0 Atcg01000 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.24 2e-61 236 Arabidopsis thaliana At5g45930 834633 CHLI2 (MAGNESIUM CHELATASE I2) encodes a second Chl I gene (CHLI2), a subunit of magnesium chelatase which is required for chlorophyll biosynthesis. Has ATPase activity, regulated by TRX-f. Involved in the assembly of the Mg chelatase complex. - - - C.G. S.X.
0.40 4e-175 615 Glycine max Gma.5672.1.A1_at D45857.1 - - 3e-47 At4g18480 CHLI1 C.G. S.X.
0.22 5e-24 111 Hordeum vulgare Contig5341_at Contig5341 - - 8e-4 At5g45930 CHLI2 (MAGNESIUM CHELATASE I2) C.G. S.X.
0.18 1e-43 178 Oryza sativa Os03g0563300 AK070720.1 - Magnesium-chelatase subunit chlI, chloroplastprecursor (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase)(Protein CS/CH-42) 1e-31 At5g45930 CHLI2 (MAGNESIUM CHELATASE I2) C.G. S.X.
0.62 1e-174 613 Populus trichocarpa PtpAffx.26613.1.S1_at CX175693 hypothetical protein - 9e-52 At4g18480 CHLI1 C.G. S.X.
0.29 1e-26 121 Triticum aestivum Ta.15668.1.S1_at CA486223 - - 1e-2 At4g18480 CHLI1 C.G. S.X.
0.36 1e-21 103 Zea mays Zm.18314.1.S1_at CO520519 oil yellow1 - 3e+0 At5g45930 CHLI2 (MAGNESIUM CHELATASE I2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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