Gene omics information

Query gene ID	1614631_at
Gene name	hypothetical protein LOC100254376
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.77	92.3	1614631_at	CB979660	hypothetical protein LOC100254376	-	1e-137	At5g19990	RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)	S.X.	H.G.	Please select
0.80	93.6	AFFX-Vvi-actin-5_at	-	actin 1	-	0			S.X.	H.G.	Please select
0.73	90.8	1614946_at	CF510992	hypothetical protein LOC100258219	-	8e-64	At4g24820	26S proteasome regulatory subunit, putative (RPN7)	S.X.	H.G.	Please select
0.71	89.5	1617936_at	BQ797736	similar to 26S proteasome subunit RPN5b	-	3e-23	At5g64760	RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B)	S.X.	H.G.	Please select
0.67	87.9	1620627_at	CF214379	hypothetical protein LOC100259195	-	1e-22	At1g20110	zinc finger (FYVE type) family protein	S.X.	H.G.	Please select
0.61	83.2	1620934_at	CA814719	hypothetical protein LOC100244635	-	1e-1	At2g40780	RNA binding / translation initiation factor	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.0	94.2	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.9	93.8	GSM287882	Green soft berry A21 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.7	93.0	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.6	92.5	GSM287883	Green soft berry A23 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.6	92.5	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.5	91.9	GSM287884	Green soft berry C7 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.4	91.3	GSM287895	Pink soft berry B13 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.4	91.3	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM287890	Pink soft berry C25 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.3	90.7	GSM287877	Green hard berry B12 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.15	8e-34	143	1622689_at	CF204846.1	-	-	6e-111	At5g19990	RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)	C.G.	S.X.	Please select
0.04	4e-5	48	1609881_at	BQ792085	26S proteasome regulatory subunit	-	3e-169	At1g53750	RPT1A (REGULATORY PARTICLE TRIPLE-A 1A)	C.G.	S.X.	Please select
0.02	1e-1	36	1610687_at	CF511229	-	-	1e-35	At2g37680	-	C.G.	S.X.	Please select
0.02	5e-1	34	1617618_at	CD798691	-	-	7e+0	At3g43400	phagocytosis and cell motility protein ELMO1-related	C.G.	S.X.	Please select
0.02	5e-1	34	1607452_at	CB348085	hypothetical protein LOC100242924	-	5e-10	At1g50320	ATHX	C.G.	S.X.	Please select
0.02	2e+0	32	1619364_at	CF208485	-	-	2e-2	At1g67400	-	C.G.	S.X.	Please select
0.02	2e+0	32	1616070_at	BQ798090	hypothetical protein LOC100242617	-	3e-111	At2g27600	SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1)	C.G.	S.X.	Please select
0.02	2e+0	32	1616034_at	CA817525	similar to BTB/POZ domain-containing protein	-	4e-23	At4g08455	BTB/POZ domain-containing protein	C.G.	S.X.	Please select
0.01	2e+0	32	1615839_at	BQ798166	hypothetical protein LOC100247786	-	3e-9	At1g04300	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.59	1e-137	490	Arabidopsis thaliana	At5g19990	832121	RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)	26S proteasome AAA-ATPase subunit	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.44	1e-107	391	Glycine max	Gma.11232.1.S1_s_at	BI943460	-	-	0	At5g19990	RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)	C.G.	S.X.	Please select
0.51	2e-146	517	Hordeum vulgare	Contig3527_at	Contig3527	-	-	4e-169	At5g19990	RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)	C.G.	S.X.	Please select
0.47	2e-137	490	Oryza sativa	Os02g0205300	AB033537.1	-	26S proteasome subunit 8 (Tat binding protein)	5e-169	At5g19990	RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.68	3e-169	595	Populus trichocarpa	Ptp.6509.1.S1_at	CF236682	hypothetical protein	-	1e-171	At5g19990	RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.54	4e-143	508	Triticum aestivum	Ta.27536.1.S1_at	BT009143.1	-	-	1e-147	At5g19990	RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)	C.G.	S.X.	Please select
0.49	2e-143	508	Zea mays	Zm.5322.1.A1_a_at	AY103724.1	hypothetical protein LOC100273032 /// hypothetical protein LOC100274445	-	9e-152	At5g19990	RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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