CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1614557_s_at

Gene name hypothetical protein LOC100243157

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 92.3 1614557_s_at CF405834 hypothetical protein LOC100243157 - 3e-62 At2g03120 ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE) S.X. H.G.
0.67 87.9 1620796_at CF208990 hypothetical LOC100245990 - 4e-5 At3g24315 AtSec20 S.X. H.G.
0.57 79.8 1615472_at CB346188 hypothetical LOC100243131 - 7e-11 At1g48790 mov34 family protein S.X. H.G.
0.44 64.1 1620526_at BQ799509 hypothetical protein LOC100261578 - 1e-104 At1g54340 ICDH (ISOCITRATE DEHYDROGENASE) S.X. H.G.
0.43 61.5 1613126_at CF214395 hypothetical protein LOC100232876 - 5e-35 At5g41950 binding S.X. H.G.
0.43 61.5 1608478_at CB969550 hypothetical protein LOC100246825 - 2e-17 At5g09810 ACT7 (ACTIN 7) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
2.8 93.4 GSM287903 Red soft berry A7 from plant 2 cluster distal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
2.3 90.7 GSM287883 Green soft berry A23 from plant 1 cluster distal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
2.3 90.7 GSM287884 Green soft berry C7 from plant 1 cluster distal position, biological rep 2 GSE11406 Expression data in individual grape berries during ripening initation
2.3 90.7 GSM147717 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 46
2.3 90.7 GSM287902 Red soft berry C30 from plant 2 cluster proximal position, biological rep 2 GSE11406 Expression data in individual grape berries during ripening initation
2.2 89.9 GSM436415 V. riparia (VR, PI588259) SD, 13h 7 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.1 89.1 GSM287882 Green soft berry A21 from plant 1 cluster proximal position, biological rep 2 GSE11406 Expression data in individual grape berries during ripening initation
2.0 88.2 GSM436373 Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.0 88.2 GSM287900 Red soft berry C15 from plant 1 cluster distal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
2.0 88.2 GSM436417 V. riparia (VR, PI588259) SD, 13h 7 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.99 0 2841 1620978_at CF405834 hypothetical protein LOC100243157 - 3e-62 At2g03120 ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE) C.G. S.X.
0.55 0 1251 1611202_at CF203579.1 - - 3e-39 At2g03120 ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE) C.G. S.X.
0.02 2e-1 36 1617733_at CA814062 - - 4e+0 At5g19210 DEAD/DEAH box helicase, putative C.G. S.X.
0.02 2e-1 36 1611334_at CF568953 - - 1e+0 At4g38495 - C.G. S.X.
0.01 2e-1 36 1611204_s_at CA816223 hypothetical protein LOC100251977 - 1e-32 At2g29960 CYP5 (CYCLOPHILIN 5) C.G. S.X.
0.02 2e-1 36 1610625_at CD802063 hypothetical protein LOC100259247 - 6e-30 At4g08960 phosphotyrosyl phosphatase activator (PTPA) family protein C.G. S.X.
0.01 9e-1 34 1620537_at BM437394 hypothetical protein LOC100266362 - 5e-20 At1g24560 unknown protein C.G. S.X.
0.02 9e-1 34 1619475_a_at BQ792147 hypothetical protein LOC100247673 - 7e-2 At5g64816 unknown protein C.G. S.X.
0.01 9e-1 34 1619641_at CB339547 - - 7e-98 Atcg00040 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.50 3e-62 240 Arabidopsis thaliana At2g03120 814841 ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE) homologous to Signal Peptide Peptidases (SPP), required for pollen development and pollen germination. No homozygotes could be recovered from a T-DNA insertion mutant. - - - C.G. S.X.
0.54 1e-175 617 Glycine max GmaAffx.8005.2.S1_at AW397421 - - 4e-67 At2g03120 ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE) C.G. S.X.
0.29 4e-41 169 Hordeum vulgare Contig479_at Contig479 - - 1e-30 At2g03120 ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE) C.G. S.X.
0.30 1e-44 182 Oryza sativa Os.28063.1.S1_at - - - 0 C.G. S.X.
0.53 2e-168 593 Populus trichocarpa PtpAffx.8691.1.S1_at CV231246 hypothetical protein - 7e-35 At2g03120 ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE) C.G. S.X.
0.19 1e-30 135 Triticum aestivum Ta.13851.1.S1_at CK170778 - - 7e-23 At2g03120 ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE) C.G. S.X.
0.27 9e-45 180 Zea mays Zm.9196.1.S1_at BE510176 hypothetical protein LOC100217073 - 4e-21 At2g03120 ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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