Gene omics information

Query gene ID	1614538_at
Gene name
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.63	84.3	1614538_at	AY427198.1	-	-	2e-1	At3g46760	protein kinase family protein	S.X.	H.G.	Please select
0.50	72.7	1608135_at	CF206119.1	-	-	1e+0	At2g47650	UXS4 (UDP-XYLOSE SYNTHASE 4)	S.X.	H.G.	Please select
0.43	61.5	1615204_at	CF371804	-	-	1e+0	At3g21580	cobalt ion transmembrane transporter	S.X.	H.G.	Please select
0.40	57.7	1610470_at	CF202637.1	-	-	1e-7	At5g15150	ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3)	S.X.	H.G.	Please select
0.39	54.9	1617917_at	CF405637	-	-	4e+0	At1g53100	acetylglucosaminyltransferase	S.X.	H.G.	Please select
0.31	41.3	1610333_at	CD711415	-	-	5e-2	At1g43800	acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative	S.X.	H.G.	Please select
0.31	41.3	1618712_at	CB003306	-	-	3e-1	At4g21330	DYT1 (DYSFUNCTIONAL TAPETUM 1)	S.X.	H.G.	Please select
0.25	30.5	1620333_at	CF608264	-	-	1e-10	At3g08020	protein binding / zinc ion binding	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.3	98.8	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
4.9	97.9	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
4.6	97.6	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
4.1	96.9	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
3.7	96.2	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
3.3	95.2	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
3.2	94.9	GSM436396	V. riparia (VR, PI588259) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
3.0	94.2	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.0	94.2	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.97	0	956	1610771_at	AY427198.1	hypothetical protein LOC100248357	-	2e-1	At3g46760	protein kinase family protein	C.G.	S.X.	Please select
0.03	3e-1	34	1611575_at	CB004035	-	-	2e-45	At1g16270	protein kinase family protein	C.G.	S.X.	Please select
0.03	3e-1	34	1607804_at	CB004035	-	-	2e-45	At1g16270	protein kinase family protein	C.G.	S.X.	Please select
0.03	1e+0	32	1617596_at	CF201215.1	hypothetical protein LOC100264999	-	1e+0	At4g32590	ferredoxin-related	C.G.	S.X.	Please select
0.02	4e+0	30	1621564_at	CB971699	-	-	6e-4	At1g77230	tetratricopeptide repeat (TPR)-containing protein	C.G.	S.X.	Please select
0.07	4e+0	30	1620043_at	AY427149.1	hypothetical protein LOC100248492	-	1e-3	At2g31880	leucine-rich repeat transmembrane protein kinase, putative	C.G.	S.X.	Please select
0.01	4e+0	30	1619503_at	CB345056	hypothetical protein LOC100254346	-	2e-124	At5g23120	HCF136	C.G.	S.X.	Please select
0.03	4e+0	30	1618494_at	CF405291	hypothetical protein LOC100264126	-	7e-5	At1g18010	-	C.G.	S.X.	Please select
0.02	4e+0	30	1617221_s_at	CF212784	hypothetical protein LOC100267236	-	3e-12	At5g60900	RLK1 (RECEPTOR-LIKE PROTEIN KINASE 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e-1	36	Arabidopsis thaliana	At3g46760	823829	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	3e-1	36	Glycine max	GmaAffx.74959.1.S1_at	CA936869	-	-	5e-3	At5g24080	protein kinase family protein	C.G.	S.X.	Please select
0.05	5e-1	34	Hordeum vulgare	HVSMEb0008I19r2_s_at	HVSMEb0008I19r2	-	-	7e-1	At3g24850	DNA binding	C.G.	S.X.	Please select
0.03	1e-1	38	Oryza sativa	Os12g0527700	AK065898.1	-	Protein kinase domain containing protein	2e-2	At1g78850	curculin-like (mannose-binding) lectin family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.14	9e-5	48	Populus trichocarpa	PtpAffx.225769.1.S1_s_at	pmrna45354	hypothetical protein	-	7e-5	At4g21230	protein kinase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	3e-1	36	Triticum aestivum	TaAffx.31044.1.S1_at	CA620075	-	-	4e-4	At3g25490	wall-associated kinase, putative	C.G.	S.X.	Please select
0.03	7e-9	59	Zea mays	Zm.168.1.A1_at	X52384.1	protein kinase1	-	2e-5	At5g02290	NAK	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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