Gene omics information

Query gene ID	1614513_at
Gene name	hypothetical protein LOC100250402
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.63	84.3	1614513_at	CF414215	hypothetical protein LOC100250402	-	2e-1	At2g03550	hydrolase	S.X.	H.G.	Please select
0.67	87.9	1621456_at	CF403507	hypothetical protein LOC100252628	-	5e-2	At2g36530	LOS2	S.X.	H.G.	Please select
0.60	81.9	1616810_at	CF404490	-	-	1e+0	At1g35880	-	S.X.	H.G.	Please select
0.42	60.1	1616958_s_at	CF371819	hypothetical protein LOC100248073	-	1e-3	Atmg00840	-	S.X.	H.G.	Please select
0.22	25.6	1620654_at	CF514699	hypothetical protein LOC100262551	-	1e-64	At3g60750	transketolase, putative	S.X.	H.G.	Please select
0.14	14.4	1612134_at	CF204393.1	similar to anthocyanidin reductase	-	6e-3	At2g02400	cinnamoyl-CoA reductase family	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.5	98.4	GSM147680	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	9
4.6	97.6	GSM147693	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	22
4.3	97.2	GSM147679	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	8
4.1	96.9	GSM147692	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation	21
4.0	96.7	GSM147698	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation	27
3.7	96.2	GSM147674	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	3
3.7	96.2	GSM147697	Vitis vinifera 'Cabernet sauvignon' mock inoculateds at 4 h post inoculation	26
3.6	96.0	GSM147673	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	2
3.3	95.2	GSM436353	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.1	94.6	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.34	6e-27	119	1611051_at	CB975150	-	-	2e-1	At5g20160	ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	C.G.	S.X.	Please select
0.31	5e-21	99	1616188_at	CD799282	hypothetical protein LOC100255589	-	1e+0	At1g09155	AtPP2-B15 (Phloem protein 2-B15)	C.G.	S.X.	Please select
0.03	1e+0	32	1619249_at	CF211945	-	-	5e-6	At2g17800	ARAC1	C.G.	S.X.	Please select
0.01	1e+0	32	1614527_at	CB914320	hypothetical protein LOC100257095	-	2e-1	At3g56850	AREB3 (ABA-RESPONSIVE ELEMENT BINDING PROTEIN 3)	C.G.	S.X.	Please select
0.03	1e+0	32	1607000_at	CD799845	-	-	9e-1	At3g48640	unknown protein	C.G.	S.X.	Please select
0.02	4e+0	30	1620238_at	AF178569.1	-	-	8e-25	At1g56600	AtGolS2 (Arabidopsis thaliana galactinol synthase 2)	C.G.	S.X.	Please select
0.02	4e+0	30	1618022_at	BM437052	hypothetical protein LOC100246411	-	2e-6	At2g34080	cysteine proteinase, putative	C.G.	S.X.	Please select
0.04	4e+0	30	1616896_at	CB977752	hypothetical protein LOC100248718	-	1e+0	At1g49715	-	C.G.	S.X.	Please select
0.02	4e+0	30	1616972_at	CF209198	hypothetical LOC100252181	-	2e-3	At3g48690	CXE12	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e-1	36	Arabidopsis thaliana	At2g03550	814884	hydrolase	F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BMOPFAV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	34	Glycine max	GmaAffx.87620.1.S1_at	BQ273464	-	-	2e-32	At5g63420	emb2746 (embryo defective 2746)	C.G.	S.X.	Please select
0.04	2e+0	32	Hordeum vulgare	HV09N10u_s_at	HV09N10u	-	-	3e+0	At1g05450	protease inhibitor/seed storage/lipid transfer protein (LTP)-related	C.G.	S.X.	Please select
0.03	7e+0	32	Oryza sativa	Os07g0132300	AU101784	-	Conserved hypothetical protein	8e-2	At4g37810	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	8e-2	38	Populus trichocarpa	PtpAffx.44191.2.A1_at	CV241745	hypothetical protein	-	9e-6	At3g48690	CXE12	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.06	6e-2	38	Triticum aestivum	Ta.26543.1.A1_at	CD491174	-	-	9e+0	At5g15790	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.04	1e-1	36	Zea mays	Zm.16576.1.A1_at	CF627643	-	-	3e+0	At3g52700	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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