CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1614504_s_at

Gene name hypothetical protein LOC100246222

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.49 69.3 1614504_s_at CF372317 hypothetical protein LOC100246222 - 7e+0 At5g39860 PRE1 (PACLOBUTRAZOL RESISTANCE1) S.X. H.G.
0.73 90.8 1606604_at CF373854 hypothetical protein LOC100241081 - 2e-6 At2g39670 radical SAM domain-containing protein S.X. H.G.
0.70 88.6 1611466_at CF372402 hypothetical protein LOC100253536 - 7e-26 At4g19100 unknown protein S.X. H.G.
0.67 87.9 1609122_at CB003768 hypothetical protein LOC100267142 - 7e-27 At2g04530 CPZ S.X. H.G.
0.63 84.3 1614149_at CF513013 hypothetical protein LOC100264613 - 2e-63 At2g01320 ABC transporter family protein S.X. H.G.
0.59 80.6 1616203_at CB343761 hypothetical protein LOC100248931 - 1e+0 At1g76940 RNA recognition motif (RRM)-containing protein S.X. H.G.
0.59 80.6 1607464_at CF516938 hypothetical protein LOC100253507 - 3e-30 At5g35220 EGY1 (ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN 1) S.X. H.G.
0.56 79.4 1609396_at CF210676 hypothetical protein LOC100249947 - 3e-10 At2g32180 PTAC18 (PLASTID TRANSCRIPTIONALLY ACTIVE 18) S.X. H.G.
0.55 77.3 1620736_a_at CD714912 hypothetical protein LOC100255654 - 3e-39 At1g11430 plastid developmental protein DAG, putative S.X. H.G.
0.53 75.2 1611866_at CF513347 hypothetical protein LOC100246501 - 6e-12 At3g53460 CP29 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.6 99.7 GSM147705 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation 34
9.2 99.5 GSM147687 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 16
9.1 99.5 GSM147693 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation 22
8.9 99.5 GSM147699 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation 28
7.9 99.3 GSM147681 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 10
7.8 99.3 GSM147675 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 4
6.3 98.8 GSM147711 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 40
6.0 98.7 GSM147735 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 64
5.8 98.6 GSM147686 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 15
5.7 98.5 GSM147729 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 58
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.98 0 1651 1615527_at CF372317 hypothetical protein LOC100246222 - 7e+0 At5g39860 PRE1 (PACLOBUTRAZOL RESISTANCE1) C.G. S.X.
0.02 3e-2 38 1613269_at CB914077 - - 4e-4 At4g30410 transcription factor C.G. S.X.
0.02 3e-2 38 1609496_at CB914077 hypothetical protein LOC100258663 - 4e-4 At4g30410 transcription factor C.G. S.X.
0.02 1e-1 36 1611716_at CF513400 hypothetical protein LOC100255395 - 5e-7 At2g38010 ceramidase family protein C.G. S.X.
0.02 5e-1 34 1617892_at CD714637 - - 3e-1 At4g12860 UNE14 (unfertilized embryo sac 14) C.G. S.X.
0.02 5e-1 34 1617417_s_at CD798528 hypothetical protein LOC100248713 - 2e-11 At4g38520 protein phosphatase 2C family protein / PP2C family protein C.G. S.X.
0.02 5e-1 34 1616024_at CF405872 hypothetical protein LOC100263542 - 8e-21 At5g15860 ATPCME (PRENYLCYSTEINE METHYLESTERASE) C.G. S.X.
0.02 5e-1 34 1615801_at CK138174.1 - - 4e-1 At1g65060 4CL3 C.G. S.X.
0.02 5e-1 34 1614077_at CD714637 - - 3e-1 At4g12860 UNE14 (unfertilized embryo sac 14) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 7e+0 32 Arabidopsis thaliana At5g39860 833982 PRE1 (PACLOBUTRAZOL RESISTANCE1) F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;P - - - C.G. S.X.
0.03 2e+0 34 Glycine max GmaAffx.15353.1.A1_at CD416337 - - 1e-4 At2g33793 unknown protein C.G. S.X.
0.03 3e+0 32 Hordeum vulgare HB15J24r_at HB15J24r - - 3e+0 At3g11050 ATFER2 (ferritin 2) C.G. S.X.
0.02 3e+0 34 Oryza sativa Os10g0102200 9638.m00029 - - 2e+0 At2g19780 leucine-rich repeat family protein / extensin family protein C.G. S.X.
0.03 9e+0 32 Populus trichocarpa PtpAffx.904.1.A1_a_at CK097736 hypothetical protein - 1e-6 At3g20510 unknown protein C.G. S.X.
0.03 7e+0 32 Triticum aestivum TaAffx.64790.1.A1_x_at BJ275876 - - 1e-2 At1g11470 - C.G. S.X.
0.03 1e+1 30 Zea mays ZmAffx.639.1.S1_at AI715067 - - 3e+0 At3g13780 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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