Gene omics information

Query gene ID	1614381_at
Gene name
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.53	75.2	1614381_at	CD713830	-	-	9e+0	At5g54930	AT hook motif-containing protein	S.X.	H.G.	Please select
0.91	98.8	1609184_at	CB342124	hypothetical protein LOC100254366	-	7e-6	At3g14640	CYP72A10	S.X.	H.G.	Please select
0.83	94.6	1616555_s_at	CB343780	-	-	1e+1	At4g35165	unknown protein	S.X.	H.G.	Please select
0.83	94.6	1619578_at	CB342051	hypothetical protein LOC100254366 /// hypothetical protein LOC100258319 /// hypothetical protein LOC100267392	-	6e-3	At3g14620	CYP72A8	S.X.	H.G.	Please select
0.53	75.2	1617035_s_at	CF205538.1	hypothetical protein LOC100260266	-	1e-10	At2g47180	AtGolS1 (Arabidopsis thaliana galactinol synthase 1)	S.X.	H.G.	Please select
0.47	67.7	1608907_s_at	CA809004	hypothetical protein LOC100260266	-	1e-30	At1g60470	AtGolS4 (Arabidopsis thaliana galactinol synthase 4)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
25.1	100.0	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
22.0	100.0	GSM322365	genotype: Chardonnay - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
20.3	99.9	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
17.7	99.9	GSM322370	genotype: Incrocio Manzoni - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
15.1	99.9	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
12.9	99.8	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
8.9	99.5	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
6.5	98.9	GSM147688	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	17
6.2	98.8	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
5.1	98.1	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e-1	36	1614415_at	BQ796809	hypothetical protein LOC100258808	-	2e+0	At2g03470	myb family transcription factor / ELM2 domain-containing protein	C.G.	S.X.	Please select
0.02	7e-1	34	1622393_at	CF373123	proline rich protein 1	-	1e+0	At5g67460	glycosyl hydrolase family protein 17	C.G.	S.X.	Please select
0.01	7e-1	34	1621533_at	CF514195	hypothetical protein LOC100248579	-	5e-45	At4g01810	protein transport protein-related	C.G.	S.X.	Please select
0.02	7e-1	34	1617683_at	CF604032	hypothetical protein LOC100248411	-	5e-16	At5g57800	CER3 (ECERIFERUM 3)	C.G.	S.X.	Please select
0.02	3e+0	32	1621270_at	CB971990	hypothetical protein LOC100252531	-	4e-4	At5g11590	TINY2 (TINY2)	C.G.	S.X.	Please select
0.02	3e+0	32	1620398_at	CA810891	hypothetical LOC100263767	-	1e-3	At3g09690	hydrolase, alpha/beta fold family protein	C.G.	S.X.	Please select
0.02	3e+0	32	1618575_at	BQ800307	hypothetical protein LOC100246744	-	3e-1	At4g31010	RNA binding	C.G.	S.X.	Please select
0.02	3e+0	32	1617882_at	CB346978	hypothetical protein LOC100265703	-	1e-19	At1g18680	HNH endonuclease domain-containing protein	C.G.	S.X.	Please select
0.01	3e+0	32	1616872_at	CB341651	hypothetical protein LOC100253885	-	3e-12	At2g46670	pseudo-response regulator, putative / timing of CAB expression 1-like protein, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	9e+0	32	Arabidopsis thaliana	At5g54930	835584	AT hook motif-containing protein	F:DNA binding;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	3e+0	34	Glycine max	PsAffx.psHB005xC21f_at	PsAffx.psHB005xC21f	-	-	7e-11	At3g53720	ATCHX20 (CATION/H+ EXCHANGER 20)	C.G.	S.X.	Please select
0.02	7e-2	38	Hordeum vulgare	HZ65L19r_at	HZ65L19r	-	-	8e-1	At3g25860	LTA2	C.G.	S.X.	Please select
0.02	1e+0	36	Oryza sativa	Os01g0111900	AK103326.1	-	Conserved hypothetical protein	1e-1	At3g06750	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	1e-2	42	Populus trichocarpa	PtpAffx.1224.2.S1_a_at	CV238624	hypothetical protein	-	2e+0	At1g77610	glucose-6-phosphate/phosphate translocator-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	2e+0	34	Triticum aestivum	Ta.30635.1.S1_at	CK592790	-	-	7e-1	At4g16330	oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	C.G.	S.X.	Please select
0.02	1e+0	34	Zea mays	Zm.6527.1.A1_at	AY105149.1	-	-	1e-1	At1g12090	ELP (EXTENSIN-LIKE PROTEIN)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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