Gene omics information

Query gene ID	1614242_at
Gene name	hypothetical protein LOC100243579
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	89.5	1614242_at	CF211976	hypothetical protein LOC100243579	-	1e-1	At5g60800	heavy-metal-associated domain-containing protein	S.X.	H.G.	Please select
0.55	77.3	1612757_at	CD801743	hypothetical protein LOC100241266	-	1e+0	At2g32560	F-box family protein	S.X.	H.G.	Please select
0.27	34.0	1613084_at	CB979577	hypothetical protein LOC100261680	-	5e-7	At5g46190	KH domain-containing protein	S.X.	H.G.	Please select
0.23	27.5	1618602_at	CD712496	hypothetical protein LOC100267246	-	4e-7	At1g79650	RAD23	S.X.	H.G.	Please select
0.15	15.6	1606771_at	CF517362	-	-	3e-39	At4g00660	DEAD/DEAH box helicase, putative	S.X.	H.G.	Please select
0.09	9.4	1614339_at	CF208988	hypothetical protein LOC100242639	-	1e+0	At1g27300	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.0	94.2	GSM436397	V. riparia (VR, PI588259) LD, 15h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436395	V. riparia (VR, PI588259) LD, 15h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436375	Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436356	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436355	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436357	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436363	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436373	Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436376	Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e+0	32	1620332_at	CF415733	similar to predicted protein	-	1e-71	At5g10390	histone H3	C.G.	S.X.	Please select
0.01	2e+0	32	1619478_at	CD004753	hypothetical protein LOC100247440	-	3e-9	At5g12010	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	32	1619256_at	CF568909	-	-	2e-106	At3g58700	60S ribosomal protein L11 (RPL11B)	C.G.	S.X.	Please select
0.02	2e+0	32	1616983_at	CF207498	hypothetical protein LOC100254117	-	1e+0	At5g45130	RHA1 (RAB HOMOLOG 1)	C.G.	S.X.	Please select
0.02	2e+0	32	1616407_at	CD715829	hypothetical protein LOC100250971	-	7e-9	At1g52510	hydrolase, alpha/beta fold family protein	C.G.	S.X.	Please select
0.02	2e+0	32	1612605_at	CD715829	-	-	7e-9	At1g52510	hydrolase, alpha/beta fold family protein	C.G.	S.X.	Please select
0.02	2e+0	32	1611499_at	CB008140	-	-	4e+0	At4g20290	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	32	1609377_at	CF215982	similar to RPL16A (ribosomal protein large subunit 16A); structural constituent of ribosome	-	2e-80	At2g42740	RPL16A	C.G.	S.X.	Please select
0.02	2e+0	32	1607715_at	CB008140	hypothetical protein LOC100257358	-	4e+0	At4g20290	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e-1	38	Arabidopsis thaliana	At5g60800	836201	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:unknown;POMFBVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.10	1e-8	61	Glycine max	Gma.17673.1.S1_at	BI970595	-	-	2e+0	At5g26170	WRKY50	C.G.	S.X.	Please select
0.03	7e-2	38	Hordeum vulgare	Contig4978_at	Contig4978	-	-	3e-3	At2g41740	VLN2 (VILLIN 2)	C.G.	S.X.	Please select
0.02	1e+0	36	Oryza sativa	Os03g0242200	AK071529.1	-	Ras GTPase family protein	9e-16	At5g09910	ATP binding / GTP binding / transcription factor binding	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.20	2e-26	121	Populus trichocarpa	PtpAffx.116900.1.S1_s_at	CV263699	hypothetical protein	-	5e-1	At5g49120	senescence-associated protein-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	2e+0	34	Triticum aestivum	TaAffx.6823.1.S1_at	CA676761	-	-	7e-2	At4g13940	MEE58 (MATERNAL EFFECT EMBRYO ARREST 58)	C.G.	S.X.	Please select
0.03	4e-3	42	Zea mays	Zm.4748.1.A1_at	BG841090	-	-	2e-1	At4g19690	IRT1 (iron-regulated transporter 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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