CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1614232_at

Gene name hypothetical protein LOC100259727

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 89.5 1614232_at CF214793 hypothetical protein LOC100259727 - 7e-11 At4g00026 - S.X. H.G.
0.32 43.1 1620106_at CF511459 hypothetical protein LOC100262007 - 3e-7 At5g52820 WD-40 repeat family protein / notchless protein, putative S.X. H.G.
0.27 34.0 1607128_at CF513398 hypothetical protein LOC100249973 - 8e-2 At1g79780 - S.X. H.G.
0.16 16.7 1612728_at BQ794691 hypothetical protein LOC100242825 - 2e-61 At3g09680 40S ribosomal protein S23 (RPS23A) S.X. H.G.
0.12 12.1 1613996_at CF373512 hypothetical protein LOC100248626 - 6e-1 At4g34470 ASK12 (ARABIDOPSIS SKP1-LIKE 12) S.X. H.G.
0.11 11.3 1612821_at CF405899 hypothetical protein LOC100249429 - 2e-1 At5g27540 MIRO1 (Miro-related GTP-ase 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.2 94.9 GSM147717 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 46
3.0 94.2 GSM436354 Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.0 94.2 GSM147741 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 70
2.8 93.4 GSM147728 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 57
2.4 91.3 GSM147729 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 58
2.3 90.7 GSM147733 Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation 62
2.3 90.7 GSM147711 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 40
2.3 90.7 GSM436353 Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.2 89.9 GSM147692 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation 21
2.1 89.1 GSM147709 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 38
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 8e-2 36 1608533_at CF212662 hypothetical protein LOC100242285 - 2e-18 At1g73640 AtRABA6a (Arabidopsis Rab GTPase homolog A6a) C.G. S.X.
0.02 3e-1 34 1617845_at CD800649 hypothetical protein LOC100263968 - 4e-35 At2g38630 - C.G. S.X.
0.03 3e-1 34 1606556_at CF372538 hypothetical protein LOC100249766 - 1e+0 At4g31380 FLP1 (FPF1-LIKE PROTEIN 1) C.G. S.X.
0.02 1e+0 32 1621700_at CB980402 hypothetical protein LOC100265931 - 3e-2 At2g39050 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.04 1e+0 32 1621340_at CB340717 - - 1e+1 At5g41450 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.02 1e+0 32 1617625_at CB006850 hypothetical LOC100246722 - 2e-6 At3g05680 EMB2016 (embryo defective 2016) C.G. S.X.
0.01 1e+0 32 1617275_at CF514442 hypothetical protein LOC100248351 - 3e+0 At5g03995 unknown protein C.G. S.X.
0.04 1e+0 32 1616102_at CF209146 - - 3e+0 At3g22570 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.02 1e+0 32 1615580_at CD797566 hypothetical protein LOC100259063 - 1e-4 At4g07400 VFB3 (VIER F-BOX PROTEINE 3) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.12 7e-11 67 Arabidopsis thaliana At4g00026 3770411 - F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MFPO - - - C.G. S.X.
0.04 1e+0 34 Glycine max GmaAffx.2741.1.A1_at AW349557 - - 6e-1 At5g10160 beta-hydroxyacyl-ACP dehydratase, putative C.G. S.X.
0.07 2e-6 52 Hordeum vulgare Contig8321_at Contig8321 - - 9e-3 At4g00026 - C.G. S.X.
0.07 3e-8 59 Oryza sativa OsAffx.12867.1.S1_at - - - 0 C.G. S.X.
0.12 3e-11 69 Populus trichocarpa PtpAffx.23321.2.S1_a_at DN487149 hypothetical protein - 2e+0 At4g00026 - C.G. S.X.
0.04 4e+0 32 Triticum aestivum TaAffx.33402.1.A1_at BU808668 - - 3e+0 At2g19510 LBD8 (LOB DOMAIN-CONTAINING PROTEIN 8) C.G. S.X.
0.04 7e+0 30 Zea mays ZmAffx.760.1.A1_at AI734521 - - 1e+1 At5g42591 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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