Gene omics information

Query gene ID	1614231_s_at
Gene name	hypothetical protein LOC100245250
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.77	92.3	1614231_s_at	CB970079	hypothetical protein LOC100245250	-	3e-5	At3g15360	TRX-M4 (ARABIDOPSIS THIOREDOXIN M-TYPE 4)	S.X.	H.G.	Please select
0.73	90.8	1611247_s_at	CF206748.1	similar to cytochrome f	-	2e+0	At1g65490	unknown protein	S.X.	H.G.	Please select
0.67	87.9	1616847_s_at	CA816751	hypothetical protein LOC100267942	-	2e-12	At5g38410	ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)	S.X.	H.G.	Please select
0.61	83.2	1610039_s_at	CA817529	similar to NADH-plastoquinone oxidoreductase subunit K	-	0	Atcg00480	-	S.X.	H.G.	Please select
0.50	72.7	1613581_at	CB981734	hypothetical protein LOC100262899	-	1e-17	At3g17800	-	S.X.	H.G.	Please select
0.43	61.5	1613691_s_at	CF511746	hypothetical protein LOC100254533	-	5e-35	At2g05100	LHCB2.1	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.9	93.8	GSM147674	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	3
2.6	92.5	GSM147705	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	34
2.6	92.5	GSM147693	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	22
2.5	91.9	GSM147714	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	43
2.5	91.9	GSM147698	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation	27
2.4	91.3	GSM147687	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	16
2.4	91.3	GSM147675	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	4
2.4	91.3	GSM147732	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	61
2.4	91.3	GSM147692	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation	21
2.3	90.7	GSM147686	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	15

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.22	4e-11	67	1611425_at	CB348035	hypothetical protein LOC100252295	-	4e-3	At3g15360	TRX-M4 (ARABIDOPSIS THIOREDOXIN M-TYPE 4)	C.G.	S.X.	Please select
0.02	6e-1	34	1620373_at	BQ793176	-	-	5e-6	At1g50320	ATHX	C.G.	S.X.	Please select
0.01	6e-1	34	1620212_at	BQ796545	hypothetical protein LOC100254595	-	7e-1	At3g63120	CYCP1	C.G.	S.X.	Please select
0.02	6e-1	34	1617522_a_at	BQ793176	hypothetical protein LOC100242924	-	5e-6	At1g50320	ATHX	C.G.	S.X.	Please select
0.02	6e-1	34	1607452_at	CB348085	hypothetical protein LOC100242924	-	5e-10	At1g50320	ATHX	C.G.	S.X.	Please select
0.02	2e+0	32	1622561_at	CF513450	hypothetical protein LOC100264847	-	6e+0	Atmg00620	-	C.G.	S.X.	Please select
0.02	2e+0	32	1622491_at	CF516970	-	-	2e+0	At2g02510	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	32	1622619_at	BQ799372	hypothetical protein LOC100252967	-	4e-7	At3g60210	chloroplast chaperonin 10, putative	C.G.	S.X.	Please select
0.02	2e+0	32	1618573_at	CF216076	-	-	3e-2	At1g29220	transcriptional regulator family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.12	3e-5	50	Arabidopsis thaliana	At3g15360	820775	TRX-M4 (ARABIDOPSIS THIOREDOXIN M-TYPE 4)	encodes a prokaryotic thioredoxin	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.22	7e-41	169	Glycine max	Gma.16500.2.S1_at	CA800769	-	-	3e-2	At1g03680	ATHM1	C.G.	S.X.	Please select
0.08	4e-3	42	Hordeum vulgare	Contig9163_at	Contig9163	-	-	2e-6	At1g03680	ATHM1	C.G.	S.X.	Please select
0.03	1e+0	36	Oryza sativa	Os01g0574700	NM_193609.1	-	-	3e-3	At5g01410	RSR4 (REDUCED SUGAR RESPONSE 4)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.28	1e-45	184	Populus trichocarpa	Ptp.4500.1.S1_at	CV226875	thioredoxin m	-	1e-7	At3g15360	TRX-M4 (ARABIDOPSIS THIOREDOXIN M-TYPE 4)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	3e-5	50	Triticum aestivum	TaAffx.52993.1.S1_at	CA697970	-	-	3e+0	At4g37530	peroxidase, putative	C.G.	S.X.	Please select
0.04	3e-3	42	Zea mays	Zm.9977.1.S1_at	AY108587.1	hypothetical protein LOC100272895	-	8e+0	At4g03520	ATHM2	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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