Gene omics information

Query gene ID	1614201_at
Gene name	hypothetical protein LOC100254259
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.97	99.9	1614201_at	CF517408	hypothetical protein LOC100254259	-	1e+0	At4g17615	CBL1 (CALCINEURIN B-LIKE PROTEIN 1)	S.X.	H.G.	Please select
0.45	64.6	1607212_s_at	CF513231	similar to F2D10.18	-	2e-10	At1g20696	HMGB3 (HIGH MOBILITY GROUP B 3)	S.X.	H.G.	Please select
0.43	61.5	1608324_at	CF568852	-	-	6e-1	At1g01940	peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein	S.X.	H.G.	Please select
0.41	58.7	1615956_at	CD712442	-	-	2e-1	At5g59280	APUM16 (Arabidopsis Pumilio 16)	S.X.	H.G.	Please select
0.40	57.7	1611856_at	CF214981	hypothetical protein LOC100240940	-	4e-86	At3g16630	KINESIN-13A	S.X.	H.G.	Please select
0.39	54.9	1621656_at	CD010235	hypothetical protein LOC100248968	-	8e-6	At1g27960	ECT9 (evolutionarily conserved C-terminal region 9)	S.X.	H.G.	Please select
0.35	48.5	1608408_at	CF404680	hypothetical protein LOC100267086	-	7e-9	At1g51500	CER5 (ECERIFERUM 5)	S.X.	H.G.	Please select
0.31	41.3	1609386_at	BQ798112	hypothetical protein LOC100248340	-	4e-1	At5g14030	translocon-associated protein beta (TRAPB) family protein	S.X.	H.G.	Please select
0.29	37.7	1619893_at	BQ799878	-	-	6e+0	At1g79050	DNA repair protein recA	S.X.	H.G.	Please select
0.27	34.0	1615467_at	CF511291	hypothetical protein LOC100245445	-	1e-13	At1g75700	HVA22G (HVA22-LIKE PROTEIN G)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
13.0	99.8	GSM436367	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
10.7	99.7	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
10.6	99.7	GSM436368	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
7.2	99.1	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
6.4	98.9	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
5.9	98.6	GSM436350	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
4.9	97.9	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
4.8	97.8	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
4.7	97.7	GSM436369	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
4.3	97.2	GSM436351	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.22	4e-31	133	1612269_at	CB345885	hypothetical protein LOC100259377	-	2e-12	At4g33000	CBL10 (CALCINEURIN B-LIKE 10)	C.G.	S.X.	Please select
0.02	7e-2	36	1617042_at	CA812448	hypothetical protein LOC100253170	-	1e-14	At3g27010	AT-TCP20	C.G.	S.X.	Please select
0.03	3e-1	34	1621874_x_at	CF204991.1	-	-	2e-23	At5g52240	MSBP1 (membrane steroid binding protein 1)	C.G.	S.X.	Please select
0.03	3e-1	34	1620723_at	CF204991.1	-	-	2e-23	At5g52240	MSBP1 (membrane steroid binding protein 1)	C.G.	S.X.	Please select
0.03	3e-1	34	1617551_at	CF607794	hypothetical protein LOC100249114	-	4e-19	At2g24270	ALDH11A3	C.G.	S.X.	Please select
0.02	3e-1	34	1614018_at	CF517456	hypothetical protein LOC100254197	-	2e-57	At1g22770	GI (GIGANTEA)	C.G.	S.X.	Please select
0.02	3e-1	34	1613881_at	CF208018	hypothetical protein LOC100253241	-	6e-38	At3g48890	ATMP2	C.G.	S.X.	Please select
0.03	3e-1	34	1612458_at	CF213766	hypothetical protein LOC100249052	-	5e-53	At4g17390	60S ribosomal protein L15 (RPL15B)	C.G.	S.X.	Please select
0.02	3e-1	34	1606958_s_at	CF208018	hypothetical protein LOC100253241	-	6e-38	At3g48890	ATMP2	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	1e+0	34	Arabidopsis thaliana	At4g17615	827481	CBL1 (CALCINEURIN B-LIKE PROTEIN 1)	Member of AtCBL (Calcineurin B-like Calcium Sensor Proteins) family. Protein level is increased upon high salt, mannitol, and cold stresses. CBL1 interacts with CIPK23 and recruits the kinase to the plasma membrane where the substrate(s) of CIPK23 may reside. CBL1 localization is regulated by protein modification including myristolation and acylation.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	3e-1	36	Glycine max	Gma.4283.1.S1_at	BI971866	-	-	2e+0	At3g25650	ASK15 (ARABIDOPSIS SKP1-LIKE 15)	C.G.	S.X.	Please select
0.03	2e+0	32	Hordeum vulgare	Contig19422_at	Contig19422	-	-	5e+0	At3g14360	lipase class 3 family protein	C.G.	S.X.	Please select
0.04	2e-3	44	Oryza sativa	Os10g0564800	CA766884	-	Calcium-binding EF-hand domain containing protein	7e-6	At5g47100	CBL9	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.15	7e-18	91	Populus trichocarpa	PtpAffx.206684.1.S1_at	pmrna13263	hypothetical protein	-	2e-24	At4g33000	CBL10 (CALCINEURIN B-LIKE 10)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.09	4e-3	42	Triticum aestivum	Ta.8541.1.A1_at	BQ162037	-	-	1e-4	At4g33000	CBL10 (CALCINEURIN B-LIKE 10)	C.G.	S.X.	Please select
0.03	4e-1	34	Zea mays	Zm.9801.1.A1_at	BM332447	-	-	4e+0	At2g10970	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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