CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1614177_at

Gene name hypothetical protein LOC100261330

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.8 1614177_at BQ799726 hypothetical protein LOC100261330 - 1e+0 At1g72290 trypsin and protease inhibitor family protein / Kunitz family protein S.X. H.G.
0.60 81.9 1611617_at CF373170 hypothetical protein LOC100261039 - 3e-1 At4g12150 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.50 72.7 1622541_at CB342787 hypothetical protein LOC100258249 - 4e-35 At5g12190 RNA recognition motif (RRM)-containing protein S.X. H.G.
0.29 37.7 1616070_at BQ798090 hypothetical protein LOC100242617 - 3e-111 At2g27600 SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1) S.X. H.G.
0.25 30.5 1619471_at BQ794353 hypothetical protein LOC100243217 - 1e-112 At3g46060 ATRAB8A S.X. H.G.
0.10 10.3 1606813_s_at CF211962 hypothetical protein LOC100245986 - 9e-77 At5g47200 ATRAB1A S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
2.1 89.1 GSM322361 genotype: Chardonnay - disease type: Bois Noir infected - rep1 GSE12842 Gene expression in grapevine in response to Bois noir infection
2.1 89.1 GSM436346 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.1 89.1 GSM436356 Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.0 88.2 GSM436359 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
1.9 87.2 GSM299457 C_i_rep2 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
1.9 87.2 GSM436361 Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
1.9 87.2 GSM147739 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 68
1.9 87.2 GSM436358 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
1.8 86.0 GSM436360 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
1.8 86.0 GSM436363 Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.15 2e-33 141 1615725_at CF568872 - - 2e-1 At3g55170 60S ribosomal protein L35 (RPL35C) C.G. S.X.
0.02 3e-1 34 1612732_at CD714809 - - 2e-25 At1g53400 unknown protein C.G. S.X.
0.02 3e-1 34 1608957_at CD714809 hypothetical protein LOC100267634 - 2e-25 At1g53400 unknown protein C.G. S.X.
0.02 1e+0 32 1617882_at CB346978 hypothetical protein LOC100265703 - 1e-19 At1g18680 HNH endonuclease domain-containing protein C.G. S.X.
0.05 1e+0 32 1617996_at CB975881 - - 4e-3 At4g10955 lipase class 3 family protein C.G. S.X.
0.02 5e+0 30 1622173_at CD719685 - - 3e-6 At5g12020 HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN) C.G. S.X.
0.03 5e+0 30 1621757_at CF373247 - - 8e-1 At1g29960 peptidase/ serine-type peptidase C.G. S.X.
0.02 5e+0 30 1618867_at CB003602 - - 5e-1 At5g23130 peptidoglycan-binding LysM domain-containing protein C.G. S.X.
0.02 5e+0 30 1618391_at CD719685 - - 3e-6 At5g12020 HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 Arabidopsis thaliana At1g72290 843561 trypsin and protease inhibitor family protein / Kunitz family protein F:endopeptidase inhibitor activity;P:biological_process unknown;C:endomembrane system;P - - - C.G. S.X.
0.07 4e-7 56 Glycine max GmaAffx.78484.1.S1_at BG725161 - - 6e+0 At5g43755 - C.G. S.X.
0.06 9e-3 40 Hordeum vulgare Contig23610_at Contig23610 - - 3e-1 At2g47010 unknown protein C.G. S.X.
0.06 4e-2 40 Oryza sativa Os01g0859400 AK072832.1 - Dual specificity protein phosphatase familyprotein 1e-1 At5g65210 TGA1 C.G. S.X.
0.16 1e-16 87 Populus trichocarpa PtpAffx.102031.1.A1_a_at CV240605 hypothetical protein - 4e+0 At3g12620 protein phosphatase 2C family protein / PP2C family protein C.G. S.X.
0.07 9e-8 57 Triticum aestivum Ta.26757.1.A1_at CD491073 - - 2e+1 At5g23535 KOW domain-containing protein C.G. S.X.
0.04 2e-6 52 Zea mays Zm.5789.2.S1_at AW562895 dual specificity protein phosphatase Diacylglycerol kinase, catalytic region - 1e-1 Atcg01090 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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