Gene omics information

Query gene ID	1614169_at
Gene name
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.94	99.3	1614169_at	CB970892	-	-	1e+0	Atmg00610	-	S.X.	H.G.	Please select
0.47	67.7	1619674_at	CD715040	-	-	3e-1	At5g40500	unknown protein	S.X.	H.G.	Please select
0.42	60.1	1608431_at	CB002912	-	-	2e-6	At2g46620	AAA-type ATPase family protein	S.X.	H.G.	Please select
0.39	54.9	1606534_at	CF516519	hypothetical protein LOC100261660	-	1e+0	At5g02420	unknown protein	S.X.	H.G.	Please select
0.38	53.6	1618712_at	CB003306	-	-	3e-1	At4g21330	DYT1 (DYSFUNCTIONAL TAPETUM 1)	S.X.	H.G.	Please select
0.38	53.6	1609483_at	CF405311	similar to EBS1 (EMS-MUTAGENIZED BRI1 SUPPRESSOR 1); UDP-glucose:glycoprotein glucosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups	-	1e+0	At3g49620	DIN11 (DARK INDUCIBLE 11)	S.X.	H.G.	Please select
0.37	51.7	1614588_s_at	CF406014	hypothetical protein LOC100253521	-	8e-2	At3g12100	cation efflux family protein / metal tolerance protein, putative	S.X.	H.G.	Please select
0.37	51.7	1619842_s_at	BQ793715	hypothetical protein LOC100244132	-	1e+0	At5g08220	unknown protein	S.X.	H.G.	Please select
0.34	46.8	1610985_at	CF404463	-	-	4e+0	At2g13510	unknown protein	S.X.	H.G.	Please select
0.33	45.7	1608817_at	CF373604	hypothetical protein LOC100263323	-	1e-2	At3g19330	polyadenylate-binding protein-related / PABP-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.6	98.9	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
5.6	98.4	GSM436367	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
5.2	98.2	GSM436396	V. riparia (VR, PI588259) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
5.1	98.1	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
4.9	97.9	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.8	97.8	GSM436413	V. riparia (VR, PI588259) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
4.5	97.5	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.9	96.6	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
3.7	96.2	GSM436355	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.5	95.7	GSM436368	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	7e-2	36	1614866_at	CA813940	hypothetical protein LOC100251829	-	9e-28	At1g55255	-	C.G.	S.X.	Please select
0.03	1e+0	32	1618338_at	CD008517	-	-	3e-1	At3g17590	BSH (BUSHY GROWTH)	C.G.	S.X.	Please select
0.03	1e+0	32	1614572_at	CD008517	-	-	3e-1	At3g17590	BSH (BUSHY GROWTH)	C.G.	S.X.	Please select
0.02	1e+0	32	1610913_at	BQ800492	hypothetical protein LOC100263796	-	4e-38	At3g48380	-	C.G.	S.X.	Please select
0.02	1e+0	32	1609415_at	CA817605	hypothetical protein LOC100254309	-	2e-62	At2g01600	epsin N-terminal homology (ENTH) domain-containing protein	C.G.	S.X.	Please select
0.02	1e+0	32	1609101_at	CB921620	hypothetical protein LOC100252214	-	9e-31	At5g34850	PAP26 (PURPLE ACID PHOSPHATASE 26)	C.G.	S.X.	Please select
0.02	5e+0	30	1622860_at	CA809326	hypothetical protein LOC100256973	-	1e-81	At2g28305	unknown protein	C.G.	S.X.	Please select
0.02	5e+0	30	1622587_at	CD801935	hypothetical protein LOC100245491	-	6e-16	At3g59050	ATPAO3 (Polyamine oxidase 3)	C.G.	S.X.	Please select
0.02	5e+0	30	1622371_at	CF518697	hypothetical protein LOC100267229	-	5e-35	At2g40600	appr-1-p processing enzyme family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+0	34	Arabidopsis thaliana	Atmg00610	-	-	hypothetical protein	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	3e-1	36	Glycine max	GmaAffx.33869.1.S1_at	CA935537	-	-	2e-1	At4g02230	60S ribosomal protein L19 (RPL19C)	C.G.	S.X.	Please select
0.04	2e+0	32	Hordeum vulgare	EBma01_SQ005_P22_s_at	EBma01_SQ005_P22	-	-	5e-1	At3g22235	-	C.G.	S.X.	Please select
0.05	2e+0	34	Oryza sativa	OsAffx.4065.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	1e+0	34	Populus trichocarpa	PtpAffx.205346.1.S1_a_at	pmrna10583	hypothetical protein	-	1e+0	At3g50610	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	4e+0	32	Triticum aestivum	TaAffx.95953.1.S1_at	CA735492	-	-	4e+0	At5g36700	PGLP1 (2-PHOSPHOGLYCOLATE PHOSPHATASE 1)	C.G.	S.X.	Please select
0.03	2e+0	32	Zea mays	Zm.2794.1.A1_at	AW067284	-	-	1e+0	At3g05600	epoxide hydrolase, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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