CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1614154_at

Gene name

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 89.5 1614154_at CF568802 - - 7e-8 At1g72440 EDA25 (embryo sac development arrest 25) S.X. H.G.
0.57 79.8 1608135_at CF206119.1 - - 1e+0 At2g47650 UXS4 (UDP-XYLOSE SYNTHASE 4) S.X. H.G.
0.48 68.8 1610470_at CF202637.1 - - 1e-7 At5g15150 ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3) S.X. H.G.
0.46 66.5 1615204_at CF371804 - - 1e+0 At3g21580 cobalt ion transmembrane transporter S.X. H.G.
0.40 57.7 1618712_at CB003306 - - 3e-1 At4g21330 DYT1 (DYSFUNCTIONAL TAPETUM 1) S.X. H.G.
0.38 53.6 1617917_at CF405637 - - 4e+0 At1g53100 acetylglucosaminyltransferase S.X. H.G.
0.27 34.0 1620333_at CF608264 - - 1e-10 At3g08020 protein binding / zinc ion binding S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.7 97.7 GSM147710 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 39
4.5 97.5 GSM147708 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 37
4.5 97.5 GSM436368 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
4.4 97.3 GSM436391 V. riparia (VR, PI588259) LD, 15h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.2 97.1 GSM436396 V. riparia (VR, PI588259) LD, 15h 7 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
4.2 97.1 GSM436388 V. riparia (VR, PI588259) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.9 96.6 GSM436346 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.7 96.2 GSM147709 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 38
3.6 96.0 GSM436413 V. riparia (VR, PI588259) SD, 13h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.1 94.6 GSM436393 V. riparia (VR, PI588259) LD, 15h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e-2 38 1606773_at CF208569 hypothetical protein LOC100243052 - 1e-18 At3g54300 ATVAMP727 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 727) C.G. S.X.
0.05 7e-2 36 1619205_at CD799106 hypothetical protein LOC100247421 - 1e+1 At5g25570 unknown protein C.G. S.X.
0.03 3e-1 34 1622162_at CD718954 - - 1e+0 At3g02390 unknown protein C.G. S.X.
0.03 3e-1 34 1619651_at CA817394 hypothetical protein LOC100245160 - 5e-25 At1g29990 PDF6 (PREFOLDIN 6) C.G. S.X.
0.03 3e-1 34 1618383_at CD718954 - - 1e+0 At3g02390 unknown protein C.G. S.X.
0.03 3e-1 34 1617378_at CB978610 hypothetical protein LOC100265457 - 7e-43 At5g13780 GCN5-related N-acetyltransferase, putative C.G. S.X.
0.04 3e-1 34 1617274_at CF372628 hypothetical protein LOC100261092 - 3e-11 At5g11580 UVB-resistance protein-related / regulator of chromosome condensation (RCC1) family protein C.G. S.X.
0.02 3e-1 34 1616011_at CB349137 hypothetical protein LOC100260003 - 9e-28 At3g13200 EMB2769 (EMBRYO DEFECTIVE 2769) C.G. S.X.
0.03 3e-1 34 1615367_at CF205999.1 hypothetical protein LOC100254890 - 1e-19 At3g02300 regulator of chromosome condensation (RCC1) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 7e-8 57 Arabidopsis thaliana At1g72440 843576 EDA25 (embryo sac development arrest 25) F:unknown;P:polar nucleus fusion;C:endomembrane system;BOMFPVA - - - C.G. S.X.
0.05 1e+0 34 Glycine max HgAffx.3572.1.A1_s_at CK349118 - - 5e-3 At2g22000 PROPEP6 (Elicitor peptide 6 precursor) C.G. S.X.
0.06 1e-1 36 Hordeum vulgare Contig3515_x_at Contig3515 - - 2e-1 At4g17680 protein binding / zinc ion binding C.G. S.X.
0.03 5e-1 36 Oryza sativa OsAffx.14412.2.S1_s_at - - - 0 C.G. S.X.
0.12 3e-20 99 Populus trichocarpa PtpAffx.225304.1.S1_at pmrna44558 hypothetical protein - 2e-49 At1g72440 EDA25 (embryo sac development arrest 25) C.G. S.X.
0.06 3e-1 36 Triticum aestivum Ta.6071.1.S1_at BJ269386 - - 3e-1 At2g29950 ELF4-L1 (ELF4-Like 1) C.G. S.X.
0.05 1e-1 36 Zea mays Zm.3633.4.A1_at CF628836 wound induced protein - 3e-1 At4g28240 wound-responsive protein-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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